RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 E9PSI1 815 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 LSRQ86X29 649 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-216ENST00000493758 TRIT1Q9H3H1 467 aaKnown RBP7.14□□□□□ -1.27
ITGB1-216ENST00000493758 ANTXR1Q9H6X2 564 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 PPT2Q9UMR5 302 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 EFR3BQ9Y2G0 817 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 INPP5FQ9Y2H2 1132 aa7.14□□□□□ -1.27
ITGB1-216ENST00000493758 CBX7O95931 251 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 ACRP10323 421 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 GUCY2CP25092 1073 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 POLR2BP30876 1174 aaKnown RBP7.13□□□□□ -1.27
ITGB1-216ENST00000493758 GBP1P32455 592 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 GIPRP48546 466 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 BNIP3Q12983 259 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 NBPF12Q5TAG4 269 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-216ENST00000493758 TP53INP2Q8IXH6 220 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 SLC9A7Q96T83 725 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 DUSP15Q9H1R2 295 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-216ENST00000493758 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
ITGB1-216ENST00000493758 H3BS24 57 aa7.12□□□□□ -1.27
ITGB1-216ENST00000493758 CLEC3AO75596 197 aa7.12□□□□□ -1.27
ITGB1-216ENST00000493758 ENOX1Q8TC92 643 aaKnown RBP7.12□□□□□ -1.27
ITGB1-216ENST00000493758 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-216ENST00000493758 SHDQ96IW2 340 aa7.12□□□□□ -1.27
ITGB1-216ENST00000493758 ATP13A1Q9HD20 1204 aa7.12□□□□□ -1.27
ITGB1-216ENST00000493758 GPATCH2Q9NW75 528 aa7.12□□□□□ -1.27
ITGB1-216ENST00000493758 ITGB5P18084 799 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 ATF4P18848 351 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-216ENST00000493758 CD96P40200 585 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 IKZF1Q13422 519 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 PLCL1Q15111 1095 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 TSPYL5Q86VY4 417 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-216ENST00000493758 TMEM192Q8IY95 271 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 DHRS1Q96LJ7 313 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 SLC6A18Q96N87 628 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 SRRTQ9BXP5 876 aaKnown RBP7.11□□□□□ -1.27
ITGB1-216ENST00000493758 SUCOQ9UBS9 1254 aaKnown RBP7.11□□□□□ -1.27
ITGB1-216ENST00000493758 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 SLC12A7Q9Y666 1083 aa7.11□□□□□ -1.27
ITGB1-216ENST00000493758 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-216ENST00000493758 PMS1P54277 932 aaKnown RBP7.1□□□□□ -1.27
ITGB1-216ENST00000493758 EIF6P56537 245 aaKnown RBP7.1□□□□□ -1.27
ITGB1-216ENST00000493758 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
ITGB1-216ENST00000493758 ZNF792Q3KQV3 632 aa7.1□□□□□ -1.27
ITGB1-216ENST00000493758 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
ITGB1-216ENST00000493758 MCTP1Q6DN14 999 aa7.1□□□□□ -1.27
ITGB1-216ENST00000493758 SYTL5Q8TDW5 730 aaPredicted RBP7.1□□□□□ -1.27
ITGB1-216ENST00000493758 MBNL3Q9NUK0 354 aaKnown RBP7.1□□□□□ -1.27
ITGB1-216ENST00000493758 ESR1P03372 595 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 IRAK1P51617 712 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
ITGB1-216ENST00000493758 SLC43A3Q8NBI5 491 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 HDAC8Q9BY41 377 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 CAPN10Q9HC96 672 aa7.09□□□□□ -1.27
ITGB1-216ENST00000493758 LRRN2O75325 713 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
ITGB1-216ENST00000493758 FGRP09769 529 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 CASP7P55210 303 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 CHMP4BP1P59074 171 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 ZP2Q05996 745 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 NMIQ13287 307 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-216ENST00000493758 BBS9Q3SYG4 887 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 CCDC81Q6ZN84 652 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 UBE2FQ969M7 185 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 CCDC120Q96HB5 630 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 GMLQ99445 158 aa7.08□□□□□ -1.28
ITGB1-216ENST00000493758 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
ITGB1-216ENST00000493758 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 ANKRD39Q53RE8 183 aa7.07□□□□□ -1.28
ITGB1-216ENST00000493758 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
ITGB1-216ENST00000493758 ATG4DQ86TL0 474 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 ZNF655Q8N720 491 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 DAGLBQ8NCG7 672 aa7.07□□□□□ -1.28
ITGB1-216ENST00000493758 PI4K2BQ8TCG2 481 aa7.07□□□□□ -1.28
ITGB1-216ENST00000493758 PHAXQ9H814 394 aaKnown RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 CARS2Q9HA77 564 aaKnown RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 ZNF214Q9UL59 606 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-216ENST00000493758 SHOXO15266 292 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 SIGLEC6O43699 453 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 TPP2P29144 1249 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-216ENST00000493758 ZYXQ15942 572 aaKnown RBP7.06□□□□□ -1.28
ITGB1-216ENST00000493758 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 ALPK1Q96QP1 1244 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 DUSP13Q9UII6 198 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 ZNF281Q9Y2X9 895 aa7.06□□□□□ -1.28
ITGB1-216ENST00000493758 FBXW10Q5XX13 1052 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 RUFY4Q6ZNE9 571 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 TTC6Q86TZ1 520 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 VPS37DQ86XT2 251 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 C8orf37Q96NL8 207 aa7.05□□□□□ -1.28
ITGB1-216ENST00000493758 MKRN2Q9H000 416 aaKnown RBP7.05□□□□□ -1.28
ITGB1-216ENST00000493758 ASCC2Q9H1I8 757 aaPredicted RBP7.05□□□□□ -1.28
ITGB1-216ENST00000493758 RC3H2Q9HBD1 1191 aaKnown RBP7.05□□□□□ -1.28
ITGB1-216ENST00000493758 PCDHB12Q9Y5F1 795 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms