RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 GALK1P51570 392 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 CTSWP56202 376 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 DUSP4Q13115 394 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 TTLL10Q6ZVT0 673 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 SIRT2Q8IXJ6 389 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
SMC4-223ENST00000493695 CWC22Q9HCG8 908 aaKnown RBP7.89□□□□□ -1.15
SMC4-223ENST00000493695 KRTAP9-7A8MTY7 169 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 AMIGO3Q86WK7 504 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 IRF2BP1Q8IU81 584 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 PHC3Q8NDX5 983 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
SMC4-223ENST00000493695 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
SMC4-223ENST00000493695 KREMEN1Q96MU8 473 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 FAM161BQ96MY7 647 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 NOC4LQ9BVI4 516 aaKnown RBP7.88□□□□□ -1.15
SMC4-223ENST00000493695 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
SMC4-223ENST00000493695 CNOT6Q9ULM6 557 aaKnown RBP7.88□□□□□ -1.15
SMC4-223ENST00000493695 SSU72P8A0A1W2PR75 194 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
SMC4-223ENST00000493695 PRRG2O14669 202 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 PF4P02776 101 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 SRFP11831 508 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 RPL10P27635 214 aaKnown RBP7.87□□□□□ -1.15
SMC4-223ENST00000493695 GBP1P32455 592 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 GBP2P32456 591 aaPredicted RBP7.87□□□□□ -1.15
SMC4-223ENST00000493695 DLG4P78352 724 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 CAMK2GQ13555 558 aaPredicted RBP7.87□□□□□ -1.15
SMC4-223ENST00000493695 CCDC74BQ96LY2 380 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 REV1Q9UBZ9 1251 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
SMC4-223ENST00000493695 CHURC1-FNTBB4DL54 471 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 F13A1P00488 732 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 BMP7P18075 431 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 CHRNEQ04844 493 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 RELL1Q8IUW5 271 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 SGPP1Q9BX95 441 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 ZCCHC4Q9H5U6 513 aa7.86□□□□□ -1.15
SMC4-223ENST00000493695 YBX2Q9Y2T7 364 aaKnown RBP7.86□□□□□ -1.15
SMC4-223ENST00000493695 NCANO14594 1321 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 SHISA3A0PJX4 238 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 PSPNO60542 156 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 CILPO75339 1184 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 FAM160A1Q05DH4 1040 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 SNAP47Q5SQN1 464 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 ADGRF1Q5T601 910 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 GATAD2BQ8WXI9 593 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 KIF2CQ99661 725 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 MRS2Q9HD23 443 aa7.85□□□□□ -1.15
SMC4-223ENST00000493695 MYOCOSA0A1B0GUC4 107 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 ST13P50502 369 aaKnown RBP7.84□□□□□ -1.15
SMC4-223ENST00000493695 SLC14A2Q15849 920 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 TMEM201Q5SNT2 666 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 CCDC84Q86UT8 332 aaPredicted RBP7.84□□□□□ -1.15
SMC4-223ENST00000493695 SLFN12Q8IYM2 578 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 ASPNQ9BXN1 380 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 SP110Q9HB58 689 aa7.84□□□□□ -1.15
SMC4-223ENST00000493695 SEMA7AO75326 666 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 HTR3BO95264 441 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 BUD31P41223 144 aaPredicted RBP7.83□□□□□ -1.16
SMC4-223ENST00000493695 DAB2P98082 770 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 LMNB2Q03252 620 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 MLECQ14165 292 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 NR0B2Q15466 257 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 WAPLQ7Z5K2 1190 aa7.83□□□□□ -1.16
SMC4-223ENST00000493695 FAM221AA4D161 298 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 RFXAPO00287 272 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 USP2O75604 605 aaPredicted RBP7.82□□□□□ -1.16
SMC4-223ENST00000493695 TEKQ02763 1124 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 SNX17Q15036 470 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 ZNF385BQ569K4 471 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 KRTAP4-2Q9BYR5 136 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 VTI1BQ9UEU0 232 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 TIMELESSQ9UNS1 1208 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 KCTD3Q9Y597 815 aa7.82□□□□□ -1.16
SMC4-223ENST00000493695 OR14I1A6ND48 311 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 PEX10O60683 326 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 FKTNO75072 461 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 HOXA5P20719 270 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 NMIQ13287 307 aaPredicted RBP7.81□□□□□ -1.16
SMC4-223ENST00000493695 TCERG1LQ5VWI1 586 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 AEBP1Q8IUX7 1158 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 GOLM1Q8NBJ4 401 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 ZNF552Q9H707 407 aaPredicted RBP7.81□□□□□ -1.16
SMC4-223ENST00000493695 PARD6AQ9NPB6 346 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 EBF1Q9UH73 591 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 RAPGEFL1Q9UHV5 662 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 USP31Q70CQ4 1352 aa7.81□□□□□ -1.16
SMC4-223ENST00000493695 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 TLR3O15455 904 aaKnown RBP7.8□□□□□ -1.16
SMC4-223ENST00000493695 CTSHP09668 335 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 RAG1P15918 1043 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 CEP128Q6ZU80 1094 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 FOXP3Q9BZS1 431 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 SIRT5Q9NXA8 310 aa7.8□□□□□ -1.16
SMC4-223ENST00000493695 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
SMC4-223ENST00000493695 SORBS3O60504 671 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms