RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 REV1Q9UBZ9 1251 aa5.81□□□□□ -1.48
PTCD3-218ENST00000493430 ZCCHC6Q5VYS8 1495 aaKnown RBP5.81□□□□□ -1.48
PTCD3-218ENST00000493430 CHURC1-FNTBB4DL54 471 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 LRRN2O75325 713 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 KRT1P04264 644 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 SIAH1Q8IUQ4 282 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 LILRA2Q8N149 483 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 KREMEN1Q96MU8 473 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 KCNK12Q9HB15 430 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 VTI1BQ9UEU0 232 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 PCDHA11Q9Y5I1 949 aa5.8□□□□□ -1.48
PTCD3-218ENST00000493430 GRIN3BO60391 1043 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 HTR3BO95264 441 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 ZGLP1P0C6A0 271 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 TRHRP34981 398 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-218ENST00000493430 CHMP4BP1P59074 171 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 SNAP47Q5SQN1 464 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 C1QL4Q86Z23 238 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 PHACTR4Q8IZ21 702 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 GOLM1Q8NBJ4 401 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 BAHD1Q8TBE0 780 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-218ENST00000493430 KCNN1Q92952 543 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 SLC26A8Q96RN1 970 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 ASPNQ9BXN1 380 aa5.79□□□□□ -1.48
PTCD3-218ENST00000493430 FITM1A5D6W6 292 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 MINDY4BA8MYZ0 360 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 GBP1P32455 592 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 FAM160A1Q05DH4 1040 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 MLECQ14165 292 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 MPP2Q14168 576 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 ATG14Q6ZNE5 492 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 SPPL2CQ8IUH8 684 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 RNF32Q9H0A6 362 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 C19orf44Q9H6X5 657 aa5.78□□□□□ -1.48
PTCD3-218ENST00000493430 POLR3KQ9Y2Y1 108 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-218ENST00000493430 RBM47A0AV96 593 aaKnown RBP5.77□□□□□ -1.49
PTCD3-218ENST00000493430 TCAF2A6NFQ2 919 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 MED14OSP0DP75 135 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-218ENST00000493430 ERCC3P19447 782 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 GLDCP23378 1020 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 NR0B2Q15466 257 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 CLEC16AQ2KHT3 1053 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 REC114Q7Z4M0 266 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 KIF2CQ99661 725 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 ASCC2Q9H1I8 757 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-218ENST00000493430 SP110Q9HB58 689 aa5.77□□□□□ -1.49
PTCD3-218ENST00000493430 CWC22Q9HCG8 908 aaKnown RBP5.77□□□□□ -1.49
PTCD3-218ENST00000493430 ETV2O00321 342 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-218ENST00000493430 TAGLNQ01995 201 aaKnown RBP5.76□□□□□ -1.49
PTCD3-218ENST00000493430 CHRNEQ04844 493 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 DUSP4Q13115 394 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 KCNA10Q16322 511 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 FAM196AQ6ZSG2 479 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 LCNL1Q6ZST4 164 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 IRF2BP1Q8IU81 584 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 FBXO27Q8NI29 283 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 ENOX1Q8TC92 643 aaKnown RBP5.76□□□□□ -1.49
PTCD3-218ENST00000493430 SLC6A17Q9H1V8 727 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 CD320Q9NPF0 282 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
PTCD3-218ENST00000493430 SHISA3A0PJX4 238 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 RGS13O14921 159 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 DNAJA2O60884 412 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 TEKQ02763 1124 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 SNX17Q15036 470 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 CWF19L2Q2TBE0 894 aaKnown RBP5.75□□□□□ -1.49
PTCD3-218ENST00000493430 TIGD5Q53EQ6 642 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 CIAPIN1Q6FI81 312 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 AMIGO3Q86WK7 504 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 VWCEQ96DN2 955 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 KBTBD4Q9NVX7 518 aa5.75□□□□□ -1.49
PTCD3-218ENST00000493430 SMG5Q9UPR3 1016 aaKnown RBP5.75□□□□□ -1.49
PTCD3-218ENST00000493430 SLC22A31A6NKX4 558 aa5.74□□□□□ -1.49
PTCD3-218ENST00000493430 TLR3O15455 904 aaKnown RBP5.74□□□□□ -1.49
PTCD3-218ENST00000493430 GARTP22102 1010 aa5.74□□□□□ -1.49
PTCD3-218ENST00000493430 RNF4P78317 190 aa5.74□□□□□ -1.49
PTCD3-218ENST00000493430 ANKS4BQ8N8V4 417 aa5.74□□□□□ -1.49
PTCD3-218ENST00000493430 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.74□□□□□ -1.49
PTCD3-218ENST00000493430 YBX2Q9Y2T7 364 aaKnown RBP5.74□□□□□ -1.49
PTCD3-218ENST00000493430 RAG1P15918 1043 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
PTCD3-218ENST00000493430 NMIQ13287 307 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-218ENST00000493430 CCDC27Q2M243 656 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 ARSHQ5FYA8 562 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 FBXL19Q6PCT2 694 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 RNF111Q6ZNA4 994 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 ERMP1Q7Z2K6 904 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 SYTL5Q8TDW5 730 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-218ENST00000493430 LINC01599Q8WXQ3 324 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 INTS4Q96HW7 963 aaKnown RBP5.73□□□□□ -1.49
PTCD3-218ENST00000493430 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 GPR160Q9UJ42 338 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 SUPT16HQ9Y5B9 1047 aaKnown RBP5.73□□□□□ -1.49
PTCD3-218ENST00000493430 PCDHB14Q9Y5E9 798 aa5.73□□□□□ -1.49
PTCD3-218ENST00000493430 NUAK1O60285 661 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms