RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 NAA16Q6N069 864 aaPredicted RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 POTEEQ6S8J3 1075 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 PI16Q6UXB8 463 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 PIP4P2Q8N4L2 257 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 MRPL50Q8N5N7 158 aaKnown RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 NSUN4Q96CB9 384 aaKnown RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 NECAB3Q96P71 396 aaPredicted RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 C1QTNF1Q9BXJ1 281 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 TANGO6Q9C0B7 1094 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 RPAP3Q9H6T3 665 aaPredicted RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 DNAJC18Q9H819 358 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 XPNPEP3Q9NQH7 507 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 EMILIN3Q9NT22 766 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 GINM1Q9NU53 330 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 SLC5A4Q9NY91 659 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 BTBD7Q9P203 1132 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 PALD1Q9ULE6 856 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 CIZ1Q9ULV3 898 aaPredicted RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 AKAP2Q9Y2D5 859 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 A0A0G2JMZ2 1700 aa7.06□□□□□ -1.28
A1CF-210ENST00000493415 SPTBN5Q9NRC6 3674 aaKnown RBP7.06□□□□□ -1.28
A1CF-210ENST00000493415 DCDC2CA8MYV0 355 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 HOXC6P09630 235 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 VCAM1P19320 739 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 ITGB8P26012 769 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 PBX2P40425 430 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 USP5P45974 858 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 JAG1P78504 1218 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 TFCP2Q12800 502 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 PRAMEF19Q5SWL8 479 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 CCDC174Q6PII3 467 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 CATSPERGQ6ZRH7 1159 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 RNF180Q86T96 592 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 NCAPG2Q86XI2 1143 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 SLC44A5Q8NCS7 719 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 ZNF384Q8TF68 577 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 CABP5Q9NP86 173 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 HMG20BQ9P0W2 317 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 MSRAQ9UJ68 235 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 FARP1Q9Y4F1 1045 aaPredicted RBP7.05□□□□□ -1.28
A1CF-210ENST00000493415 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
A1CF-210ENST00000493415 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 A0A1W2PQ45 241 aaPredicted RBP7.04□□□□□ -1.28
A1CF-210ENST00000493415 A0A1W2PQY0 241 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 SPDYE16A6NNV3 312 aaPredicted RBP7.04□□□□□ -1.28
A1CF-210ENST00000493415 GRXCR1A8MXD5 290 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 KIAA0355O15063 1070 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 PGK1P00558 417 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 ERCC3P19447 782 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 PPIGQ13427 754 aaKnown RBP eCLIP7.04□□□□□ -1.28
A1CF-210ENST00000493415 GSE1Q14687 1217 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 TTC39AQ5SRH9 613 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 AKNAD1Q5T1N1 836 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 OLFML2BQ68BL8 750 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 FOXP4Q8IVH2 680 aaPredicted RBP7.04□□□□□ -1.28
A1CF-210ENST00000493415 RASEFQ8IZ41 740 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 C12orf42Q96LP6 360 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.04□□□□□ -1.283e-8■■■■□ 25
A1CF-210ENST00000493415 MOV10L1Q9BXT6 1211 aaKnown RBP7.04□□□□□ -1.28
A1CF-210ENST00000493415 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 STARD7Q9NQZ5 370 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 PHF24Q9UPV7 400 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 HDAC5Q9UQL6 1122 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 LAMA2P24043 3122 aaKnown RBP7.04□□□□□ -1.28
A1CF-210ENST00000493415 DNAH12Q6ZR08 3092 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 PARP14Q460N5 1801 aa7.04□□□□□ -1.28
A1CF-210ENST00000493415 MPHOSPH10O00566 681 aaKnown RBP7.03□□□□□ -1.28
A1CF-210ENST00000493415 UQCRFS1P1P0C7P4 283 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 MCAMP43121 646 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 RAB30Q15771 203 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 AAK1Q2M2I8 961 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 CERKLQ49MI3 558 aaPredicted RBP7.03□□□□□ -1.28
A1CF-210ENST00000493415 C1orf53Q5VUE5 145 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 ACER1Q8TDN7 264 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 VTI1AQ96AJ9 217 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 LENG1Q96BZ8 264 aaPredicted RBP7.03□□□□□ -1.28
A1CF-210ENST00000493415 FAM212AQ96EL1 285 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 MMP19Q99542 508 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 PPP1R12CQ9BZL4 782 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 SPATC1LQ9H0A9 340 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 MTIF3Q9H2K0 278 aaKnown RBP7.03□□□□□ -1.28
A1CF-210ENST00000493415 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 SNRKQ9NRH2 765 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 SMC4Q9NTJ3 1288 aa7.03□□□□□ -1.28
A1CF-210ENST00000493415 MROH7Q68CQ1 1323 aa7.02□□□□□ -1.28
A1CF-210ENST00000493415 MCM3APO60318 1980 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 SRGAP3O43295 1099 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 STRNO43815 780 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 COBLO75128 1261 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 TIMP1P01033 207 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 ACRP10323 421 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 FCER1AP12319 257 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 AKR1A1P14550 325 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 ARID4AP29374 1257 aaPredicted RBP7.02□□□□□ -1.29
A1CF-210ENST00000493415 DYNLL1P63167 89 aaKnown RBP7.02□□□□□ -1.29
A1CF-210ENST00000493415 TFF2Q03403 129 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 ADGRE1Q14246 886 aa7.02□□□□□ -1.29
A1CF-210ENST00000493415 TMEM31Q5JXX7 168 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms