RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ICA1Q05084 483 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 MORN1Q5T089 497 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 TICAM2Q86XR7 235 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 PORCNQ9H237 461 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
LRTM1-202ENST00000493075 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
LRTM1-202ENST00000493075 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
LRTM1-202ENST00000493075 RGS2P41220 211 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 CRISPLD2Q9H0B8 497 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
LRTM1-202ENST00000493075 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 M0R2C6 588 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
LRTM1-202ENST00000493075 EEF2P13639 858 aaKnown RBP13.74□□□□□ -0.21
LRTM1-202ENST00000493075 CYP2B6P20813 491 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 DSG3P32926 999 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 IFNL3Q8IZI9 196 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 MB21D1Q8N884 522 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 NACAP1Q9BZK3 213 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
LRTM1-202ENST00000493075 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
LRTM1-202ENST00000493075 HMX1Q9NP08 348 aaPredicted RBP13.74□□□□□ -0.21
LRTM1-202ENST00000493075 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
LRTM1-202ENST00000493075 APPP05067 770 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 RASA1P20936 1047 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 PTPREP23469 700 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 PDE1AP54750 535 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 MAP2K5Q13163 448 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 MAP3K21Q5TCX8 1036 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 SMC5Q8IY18 1101 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 TRIB2Q92519 343 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.73□□□□□ -0.21
LRTM1-202ENST00000493075 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.21
LRTM1-202ENST00000493075 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
LRTM1-202ENST00000493075 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
LRTM1-202ENST00000493075 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
LRTM1-202ENST00000493075 KIAA0100Q14667 2235 aaKnown RBP13.72□□□□□ -0.21
LRTM1-202ENST00000493075 BRCA2P51587 3418 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 STRNO43815 780 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 HOXC6P09630 235 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 TDO2P48775 406 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
LRTM1-202ENST00000493075 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
LRTM1-202ENST00000493075 APBA2Q99767 749 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 GOPCQ9HD26 462 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 ADAMTS5Q9UNA0 930 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 NAV1Q8NEY1 1877 aa13.72□□□□□ -0.21
LRTM1-202ENST00000493075 FLOT1O75955 427 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 FARP2O94887 1054 aaPredicted RBP13.71□□□□□ -0.21
LRTM1-202ENST00000493075 ZKSCAN1P17029 563 aaPredicted RBP13.71□□□□□ -0.21
LRTM1-202ENST00000493075 TRIM32Q13049 653 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 GRB14Q14449 540 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 SPICE1Q8N0Z3 855 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.21
LRTM1-202ENST00000493075 SPATC1LQ9H0A9 340 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 MGAMO43451 1857 aa13.71□□□□□ -0.21
LRTM1-202ENST00000493075 MKI67P46013 3256 aaKnown RBP13.71□□□□□ -0.22
LRTM1-202ENST00000493075 IGKV6D-41A0A0C4DH26 115 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
LRTM1-202ENST00000493075 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 PDE4BQ07343 736 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 CACNB2Q08289 660 aaPredicted RBP13.7□□□□□ -0.22
LRTM1-202ENST00000493075 MKL1Q969V6 931 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 NAPBQ9H115 298 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 MROH8Q9H579 483 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
LRTM1-202ENST00000493075 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
LRTM1-202ENST00000493075 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
LRTM1-202ENST00000493075 PPARAQ07869 468 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 WDR78Q5VTH9 848 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 ABRAQ8N0Z2 381 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 DPF3Q92784 378 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
LRTM1-202ENST00000493075 F5H6K3 240 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 SLC34A2O95436 690 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 SLC25A27O95847 323 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 IGHA2P01877 340 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 IGHDP01880 384 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 ERCC3P19447 782 aa13.68□□□□□ -0.22
LRTM1-202ENST00000493075 NUCB1Q02818 461 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms