RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GPATCH4Q5T3I0 446 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 ABRAXAS1Q6UWZ7 409 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 PACS1Q6VY07 963 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 CAPN12Q6ZSI9 719 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 NEK10Q6ZWH5 1172 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 CEP68Q76N32 757 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TMEM151BQ8IW70 566 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 DCLK2Q8N568 766 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 NFATC2IPQ8NCF5 419 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 RASGRP4Q8TDF6 673 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 FBF1Q8TES7 1133 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 GJA10Q969M2 543 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 ZBTB9Q96C00 473 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 TBATAQ96M53 351 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 PPM1MQ96MI6 270 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 GBP4Q96PP9 640 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 ALPK1Q96QP1 1244 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 PURBQ96QR8 312 aaKnown RBP4.84□□□□□ -1.63
BRCA1-220ENST00000492859 KATNAL1Q9BW62 490 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 UNC45AQ9H3U1 944 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 QPCTLQ9NXS2 382 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 ARHGAP28Q9P2N2 729 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 MCM8Q9UJA3 840 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 MSRB2Q9Y3D2 182 aa4.84□□□□□ -1.63
BRCA1-220ENST00000492859 RNF123Q5XPI4 1314 aa4.84□□□□□ -1.64
BRCA1-220ENST00000492859 ANO9A1A5B4 782 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 SERTM1A2A2V5 107 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM221AA4D161 298 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM155AB1AL88 458 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 AKR1B15C9JRZ8 316 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ZBTB24O43167 697 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 MBD4O95243 580 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 IGHA2P01877 340 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 CFHP08603 1231 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 DESP17661 470 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 MAN2A2P49641 1150 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 SEPHS1P49903 392 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 PDE6CP51160 858 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 PIP4K2BP78356 416 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 PLCB3Q01970 1234 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 CACNB2Q08289 660 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 SF3B3Q15393 1217 aaKnown RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 TM4SF20Q53R12 229 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ANKRD39Q53RE8 183 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 WDR44Q5JSH3 913 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM117BQ6P1L5 589 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 LDHAL6AQ6ZMR3 332 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 SDCCAG8Q86SQ7 713 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 RTKN2Q8IZC4 609 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 VPS52Q8N1B4 723 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 THEMISQ8N1K5 641 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ABTB2Q8N961 1025 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM184AQ8NB25 1140 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM174AQ8TBP5 190 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 PARD3BQ8TEW8 1205 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ARHGEF2Q92974 986 aaKnown RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 CRELD1Q96HD1 420 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 DHRS1Q96LJ7 313 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 NOL10Q9BSC4 688 aaKnown RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 IL21Q9HBE4 155 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ATP6V0A4Q9HBG4 840 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 TCF7L2Q9NQB0 619 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 DDX21Q9NR30 783 aaKnown RBP eCLIP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 TBC1D7Q9P0N9 293 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 STIM2Q9P246 746 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 GGT7Q9UJ14 662 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 ZNF180Q9UJW8 692 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 FAM184BQ9ULE4 1060 aa4.83□□□□□ -1.64
BRCA1-220ENST00000492859 BARX2Q9UMQ3 279 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-220ENST00000492859 A0A087X0B3 334 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NUTM2BA6NNL0 878 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NUTM2EB1AL46 878 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 KLHL41O60662 606 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 ASMTLO95671 621 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 APBB3O95704 486 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 CYP17A1P05093 508 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 ZSCAN20P17040 1043 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 ATP6V1E1P36543 226 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 MAPK9P45984 424 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 LIMK1P53667 647 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 MTMR1Q13613 665 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 KIF4BQ2VIQ3 1234 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 VPS53Q5VIR6 699 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NUTM2DQ5VT03 806 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 XRRA1Q6P2D8 792 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 FAM196AQ6ZSG2 479 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 HS2ST1Q7LGA3 356 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 SAPCD2Q86UD0 394 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NLRP14Q86W24 1093 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NUTM2AQ8IVF1 878 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 SLC44A2Q8IWA5 706 aaPredicted RBP4.82□□□□□ -1.64
BRCA1-220ENST00000492859 CEP57L1Q8IYX8 460 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NAT8LQ8N9F0 302 aa4.82□□□□□ -1.64
BRCA1-220ENST00000492859 NAXEQ8NCW5 288 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms