RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 UBR5O95071 2799 aaPredicted RBP5.64□□□□□ -1.51
UBR4-215ENST00000492606 IGF2RP11717 2491 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 SPTAN1Q13813 2472 aaKnown RBP5.64□□□□□ -1.51
UBR4-215ENST00000492606 LILRA1O75019 489 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 IL9P15248 144 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 SERPINB4P48594 390 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 LRSAM1Q6UWE0 723 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 CAPN12Q6ZSI9 719 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 TMC4Q7Z404 712 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 FRMD5Q7Z6J6 570 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 GAS2L2Q8NHY3 880 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 NKD2Q969F2 451 aaPredicted RBP5.64□□□□□ -1.51
UBR4-215ENST00000492606 PRIMPOLQ96LW4 560 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 ATP6V0A2Q9Y487 856 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 MTCH2Q9Y6C9 303 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 WASHC2AQ641Q2 1341 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 RTL1A6NKG5 1358 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 ABCC12Q96J65 1359 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 OTOFQ9HC10 1997 aa5.64□□□□□ -1.51
UBR4-215ENST00000492606 M0R2N6 131 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 RFXAPO00287 272 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 ZBTB24O43167 697 aaPredicted RBP5.63□□□□□ -1.51
UBR4-215ENST00000492606 PRMT3O60678 531 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 ARID4AP29374 1257 aaPredicted RBP5.63□□□□□ -1.51
UBR4-215ENST00000492606 WEE1P30291 646 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 EPHA4P54764 986 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 DPP8Q6V1X1 898 aaPredicted RBP5.63□□□□□ -1.51
UBR4-215ENST00000492606 TPTE2Q6XPS3 522 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 DNAJC14Q6Y2X3 702 aaPredicted RBP5.63□□□□□ -1.51
UBR4-215ENST00000492606 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
UBR4-215ENST00000492606 OPTNQ96CV9 577 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 IRF2BPLQ9H1B7 796 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 MYOZ2Q9NPC6 264 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 PRKAG2Q9UGJ0 569 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 AOX1Q06278 1338 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 SPTA1P02549 2419 aa5.63□□□□□ -1.51
UBR4-215ENST00000492606 SOWAHDA6NJG2 315 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 BTBD19C9JJ37 291 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 NR3C2P08235 984 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 VIL1P09327 827 aaKnown RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 ADD1P35611 737 aaKnown RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 RAB15P59190 212 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 RSPO4Q2I0M5 234 aaPredicted RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 B4GALNT3Q6L9W6 998 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 VASH1Q7L8A9 365 aaPredicted RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 TSEN2Q8NCE0 465 aaKnown RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 CRAMP1Q96RY5 1269 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 ELP3Q9H9T3 547 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 ZNF358Q9NW07 568 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 JAG2Q9Y219 1238 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 CENPJQ9HC77 1338 aaPredicted RBP5.62□□□□□ -1.51
UBR4-215ENST00000492606 KALRNO60229 2985 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 OTOGLQ3ZCN5 2332 aa5.62□□□□□ -1.51
UBR4-215ENST00000492606 TRIM43BA6NCK2 446 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 TMEM221A6NGB7 291 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 M0R296 226 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 TAF4O00268 1085 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 POU3F3P20264 500 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 RTP1P59025 263 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 FKBP5Q13451 457 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 CCDC27Q2M243 656 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 C2CD3Q4AC94 2353 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 SOWAHCQ53LP3 525 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 NBPF10Q6P3W6 841 aaKnown RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 CCDC129Q6ZRS4 1044 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 KDF1Q8NAX2 398 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 CCER1Q8TC90 406 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 RPGRQ92834 1020 aaKnown RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 TRIM43Q96BQ3 446 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 NKX2-4Q9H2Z4 354 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 PRDM5Q9NQX1 630 aaPredicted RBP5.61□□□□□ -1.51
UBR4-215ENST00000492606 SRPK3Q9UPE1 567 aa5.61□□□□□ -1.51
UBR4-215ENST00000492606 ECE2O60344 883 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 USP2O75604 605 aaPredicted RBP5.6□□□□□ -1.51
UBR4-215ENST00000492606 FSHRP23945 695 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 GTF2A2P52657 109 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 FCGRTP55899 365 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 DMWDQ09019 674 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 SLC39A6Q13433 755 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 LARP1BQ659C4 914 aaKnown RBP5.6□□□□□ -1.51
UBR4-215ENST00000492606 SUGP1Q8IWZ8 645 aaKnown RBP5.6□□□□□ -1.51
UBR4-215ENST00000492606 TMEFF1Q8IYR6 380 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 FBXL6Q8N531 539 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 EHBP1Q8NDI1 1231 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 SPATA18Q8TC71 538 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 GMLQ99445 158 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
UBR4-215ENST00000492606 ETNK1Q9HBU6 452 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 SEPT3Q9UH03 358 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 MUTYHQ9UIF7 546 aa5.6□□□□□ -1.51
UBR4-215ENST00000492606 YBX2Q9Y2T7 364 aaKnown RBP5.6□□□□□ -1.51
UBR4-215ENST00000492606 FLT4P35916 1363 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 WNT7AO00755 349 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 CD2BP2O95400 341 aaKnown RBP5.59□□□□□ -1.51
UBR4-215ENST00000492606 AVPR2P30518 371 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 GGCXP38435 758 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 ATXN1P54253 815 aaKnown RBP5.59□□□□□ -1.51
UBR4-215ENST00000492606 RING1Q06587 406 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 PKN1Q16512 942 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms