RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 ADAMTS3O15072 1205 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ABL1P00519 1130 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TRIM21P19474 475 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 KANK3Q6NY19 840 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TRMT1LQ7Z2T5 733 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SLC35F6Q8N357 371 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PLCD1P51178 756 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 KDM3BQ7LBC6 1761 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CAMTA1Q9Y6Y1 1673 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 DYMQ7RTS9 669 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TXNRD3Q86VQ6 643 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 STAG1Q8WVM7 1258 aa17.18■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 OAS2P29728 719 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ASIC1P78348 528 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ARID5AQ03989 594 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PTPROQ16827 1216 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RAD9BQ6WBX8 426 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SRRTQ9BXP5 876 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PARD6BQ9BYG5 372 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 G3V3G9 751 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 FXR1P51114 621 aaKnown RBP eCLIP17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NGLY1Q96IV0 654 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NAPAP54920 295 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PLA2G12BQ9BX93 195 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 VPS18Q9P253 973 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CTR9Q6PD62 1173 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ANKRD13CQ8N6S4 541 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 DEF6Q9H4E7 631 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 JADE2Q9NQC1 790 aa17.16■□□□□ 0.34
TNFRSF1B-203ENST00000492361 C6orf229H3BNL8 230 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TXKP42681 527 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RNASE9P60153 205 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SPATA1Q5VX52 437 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 DTHD1Q6ZMT9 781 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 GOLGA1Q92805 767 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 FAM84BQ96KN1 310 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TBC1D7Q9P0N9 293 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RTL9Q8NET4 1388 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SCG2P13521 617 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PAK1Q13153 545 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MORC3Q14149 939 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TERF2Q15554 542 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 KCTD19Q17RG1 926 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RGS22Q8NE09 1264 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ENOX1Q8TC92 643 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CHP1Q99653 195 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CTAGE9A4FU28 777 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ACTN4O43707 911 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 CCNT1O60563 726 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
TNFRSF1B-203ENST00000492361 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ANKRD65E5RJM6 399 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FGFR2P21802 821 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KRT31Q15323 416 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 HSP90B2PQ58FF3 399 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 FRMPD2Q68DX3 1309 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KCNJ18B7U540 433 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 KCNJ12Q14500 433 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TRIM65Q6PJ69 517 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 CLEC10AQ8IUN9 316 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 POLD4Q9HCU8 107 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 C5P01031 1676 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 STX10O60499 249 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 TECP42680 631 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 DPYDQ12882 1025 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 RNF26Q9BY78 433 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
TNFRSF1B-203ENST00000492361 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-203ENST00000492361 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms