RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 FAM227BQ96M60 508 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 GPR101Q96P66 508 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SELENOOQ9BVL4 669 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 GPR108Q9NPR9 543 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TMEM260Q9NX78 707 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TLR7Q9NYK1 1049 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ZIM2Q9NZV7 527 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 LUZP4Q9P127 313 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 KIAA1024Q9UPX6 916 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SMC3Q9UQE7 1217 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 MTMR6Q9Y217 621 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 ATP6V1DQ9Y5K8 247 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 SOS2Q07890 1332 aaPredicted RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 WDR17Q8IZU2 1322 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PCDH11XQ9BZA7 1347 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PCDH11YQ9BZA8 1340 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 PARP4Q9UKK3 1724 aaKnown RBP4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 TNS2Q63HR2 1409 aa4.38□□□□□ -1.71
ATPAF1-206ENST00000492233 A0A087WZG4 1122 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 A0A0D9SFI3 127 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF26B4DH59 902 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 KIF3CO14782 793 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 GPR182O15218 404 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 FIBPO43427 364 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 KCNQ2O43526 872 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CPA1P15085 419 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 RPS6KB1P23443 525 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 VARSP26640 1264 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 PMLP29590 882 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 ATICP31939 592 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 UBE2HP62256 183 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 FOXO4P98177 505 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 SQSTM1Q13501 440 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 KRT32Q14532 448 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 MLC1Q15049 377 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 ANKRD1Q15327 319 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CHRNA2Q15822 529 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CDC37Q16543 378 aaPredicted RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 ME3Q16798 604 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 UVSSAQ2YD98 709 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 FAM83BQ5T0W9 1011 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC183Q5T5S1 534 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF14Q5TI25 921 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 TYW1BQ6NUM6 668 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 DPY19L2Q6NUT2 758 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 ERAP2Q6P179 960 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF10Q6P3W6 841 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 BRINP3Q76B58 766 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CCDC83Q8IWF9 413 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 PHTF2Q8N3S3 785 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF15Q8N660 670 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 OTUD6BQ8N6M0 293 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 TTC13Q8NBP0 860 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 PPHLN1Q8NEY8 458 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 KLHDC4Q8TBB5 520 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 RASGRP4Q8TDF6 673 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 CHAC2Q8WUX2 184 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 HAUS7Q99871 368 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 FSD1Q9BTV5 496 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 NBPF3Q9H094 633 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 SIL1Q9H173 461 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 DNAJC25Q9H1X3 360 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 BOLA2Q9H3K6 86 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 TSPY26PQ9H489 355 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 ATG3Q9NT62 314 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 MCM8Q9UJA3 840 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 LEMD3Q9Y2U8 911 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 PCDHGA10Q9Y5H3 936 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 C5P01031 1676 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 SH3TC1Q8TE82 1336 aa4.37□□□□□ -1.71
ATPAF1-206ENST00000492233 STRCP1A6NGW2 1772 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 SYCE3A1L190 88 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 POTEFA5A3E0 1075 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 PRSS47A8MTI9 375 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 GADD45BO75293 160 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 CIAO1O76071 339 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 ASMTLO95671 621 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 PDCP20941 246 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 EIF4BP23588 611 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 GJB2P29033 226 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 MCM5P33992 734 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 HALP42357 657 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 TFCP2Q12800 502 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 TRIM28Q13263 835 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 TOB2Q14106 344 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 TCEA2Q15560 299 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 DALRD3Q5D0E6 543 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 IL31Q6EBC2 164 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 PDXDC1Q6P996 788 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 BLOC1S2Q6QNY1 142 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 LMBR1LQ6UX01 489 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 TTLL7Q6ZT98 887 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 ATG9AQ7Z3C6 839 aa4.36□□□□□ -1.71
ATPAF1-206ENST00000492233 UBE3BQ7Z3V4 1068 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms