RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	NOL9	Q5SY16	702 aa	Known RBP	11.41	□□□□□ -0.58
TRO-223	ENST00000492142	LDLRAD1	Q5T700	205 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	SYNE3	Q6ZMZ3	975 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	CATIP	Q7Z7H3	387 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	HSCB	Q8IWL3	235 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	CCDC144CP	Q8IYA2	1237 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	ZNF654	Q8IZM8	581 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	LRRC47	Q8N1G4	583 aa	Known RBP	11.41	□□□□□ -0.58
TRO-223	ENST00000492142	IL27	Q8NEV9	243 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	NUP133	Q8WUM0	1156 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	SNX21	Q969T3	373 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	MKL1	Q969V6	931 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	SLC10A4	Q96EP9	437 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	MYL10	Q9BUA6	226 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	TBC1D2	Q9BYX2	928 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	ARHGEF10L	Q9HCE6	1279 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	SNCAIP	Q9Y6H5	919 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	ZHX2	Q9Y6X8	837 aa		11.41	□□□□□ -0.58
TRO-223	ENST00000492142	PASK	Q96RG2	1323 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ATAD5	Q96QE3	1844 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142		A0A1W2PRG0	241 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	GOLGA8B	A8MQT2	603 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ZBTB43	O43298	467 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	LARGE1	O95461	756 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	PDIA3	P30101	505 aa	Known RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ECE1	P42892	770 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	NOV	P48745	357 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	FKBP1B	P68106	108 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	CCT2	P78371	535 aa	Known RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	SPP2	Q13103	211 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ZYX	Q15942	572 aa	Known RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ME3	Q16798	604 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	SGMS1	Q86VZ5	419 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	NECAB1	Q8N987	351 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	PNMA1	Q8ND90	353 aa		11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ZNF274	Q96GC6	653 aa	Predicted RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	GREB1L	Q9C091	1923 aa	Predicted RBP	11.4	□□□□□ -0.58
TRO-223	ENST00000492142	MYH4	Q9Y623	1939 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	TRIM75P	A6NK02	468 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142		K7ELQ4	463 aa	Predicted RBP	11.39	□□□□□ -0.59
TRO-223	ENST00000492142	EVC	P57679	992 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	DOCK1	Q14185	1865 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	BECN1	Q14457	450 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	APOA5	Q6Q788	366 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	MICU3	Q86XE3	530 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	TMX3	Q96JJ7	454 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	TRPM7	Q96QT4	1865 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	FEZ1	Q99689	392 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	WDR18	Q9BV38	432 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	SLK	Q9H2G2	1235 aa	Predicted RBP	11.39	□□□□□ -0.59
TRO-223	ENST00000492142	AS3MT	Q9HBK9	375 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	HPS5	Q9UPZ3	1129 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	TMX2	Q9Y320	296 aa		11.39	□□□□□ -0.59
TRO-223	ENST00000492142	GOLGA8A	A7E2F4	631 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142		F5H6K3	240 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	PFKFB2	O60825	505 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	DTNB	O60941	627 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	SLC4A3	P48751	1232 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	METAP2	P50579	478 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
TRO-223	ENST00000492142	HUNK	P57058	714 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	KLRC3	Q07444	240 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	TROAP	Q12815	778 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	FSTL1	Q12841	308 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	SLFN13	Q68D06	897 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	ERO1B	Q86YB8	467 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	CCDC83	Q8IWF9	413 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	SPICE1	Q8N0Z3	855 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	FANCB	Q8NB91	859 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	SPRYD3	Q8NCJ5	442 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	ZNF280C	Q8ND82	737 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	OTUD5	Q96G74	571 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	SH2D4A	Q9H788	454 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	NCOA5	Q9HCD5	579 aa	Known RBP	11.38	□□□□□ -0.59
TRO-223	ENST00000492142	ISY1	Q9ULR0	285 aa	Known RBP	11.38	□□□□□ -0.59
TRO-223	ENST00000492142	AFG3L2	Q9Y4W6	797 aa		11.38	□□□□□ -0.59
TRO-223	ENST00000492142	OTOF	Q9HC10	1997 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	PAPPA2	Q9BXP8	1791 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	SPDYE5	A6NIY4	337 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	USP17L10	C9JJH3	530 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	DDAH1	O94760	285 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	NDUFB10	O96000	172 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	GOLGA8H	P0CJ92	632 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CALM1	P0DP23	149 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CALM2	P0DP24	149 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CALM3	P0DP25	149 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CD44	P16070	742 aa	Known RBP	11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CDC27	P30260	824 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	ADD1	P35611	737 aa	Known RBP	11.37	□□□□□ -0.59
TRO-223	ENST00000492142	PPAT	Q06203	517 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	SCRN1	Q12765	414 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	DGKZ	Q13574	1117 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	MTMR2	Q13614	643 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	RTN1	Q16799	776 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CCDC96	Q2M329	555 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	KIAA1755	Q5JYT7	1200 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	USP17L2	Q6R6M4	530 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	RASGRP2	Q7LDG7	609 aa		11.37	□□□□□ -0.59
TRO-223	ENST00000492142	CTCFL	Q8NI51	663 aa	Predicted RBP	11.37	□□□□□ -0.59
TRO-223	ENST00000492142	OPTN	Q96CV9	577 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms