RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 ANTXR2P58335 489 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 MAP2K1Q02750 393 aaPredicted RBP27.33■■□□□ 1.97
SCN5A-213ENST00000491944 SART3Q15020 963 aaKnown RBP27.33■■□□□ 1.97
SCN5A-213ENST00000491944 TREML2Q5T2D2 321 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 GPAT2Q6NUI2 795 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 ANKRD23Q86SG2 305 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 SPICE1Q8N0Z3 855 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 FAM43AQ8N2R8 423 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 ENAHQ8N8S7 591 aaPredicted RBP27.33■■□□□ 1.97
SCN5A-213ENST00000491944 MKL1Q969V6 931 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 C12orf42Q96LP6 360 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 TTC14Q96N46 770 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 AGTPBP1Q9UPW5 1226 aa27.33■■□□□ 1.97
SCN5A-213ENST00000491944 ERICH2A1L162 156 aa27.32■■□□□ 1.96
SCN5A-213ENST00000491944 IFIT3O14879 490 aaKnown RBP27.32■■□□□ 1.96
SCN5A-213ENST00000491944 PRC1O43663 620 aa27.32■■□□□ 1.96
SCN5A-213ENST00000491944 TOP1P11387 765 aaKnown RBP27.32■■□□□ 1.96
SCN5A-213ENST00000491944 NOVP48745 357 aa27.32■■□□□ 1.96
SCN5A-213ENST00000491944 COL9A3Q14050 684 aaPredicted RBP27.32■■□□□ 1.96
SCN5A-213ENST00000491944 RCSD1Q6JBY9 416 aa27.32■■□□□ 1.96
SCN5A-213ENST00000491944 TMEM47Q9BQJ4 181 aa27.32■■□□□ 1.96
SCN5A-213ENST00000491944 VCAM1P19320 739 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 KIAA1755Q5JYT7 1200 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 DGKHQ86XP1 1220 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 LPAR1Q92633 364 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 SYNPO2Q9UMS6 1093 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 MTMR7Q9Y216 660 aa27.31■■□□□ 1.96
SCN5A-213ENST00000491944 F5H6K3 240 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 PDHXO00330 501 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 PSMA5P28066 241 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 KLRC3Q07444 240 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 TMEM67Q5HYA8 995 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 IFIT1BQ5T764 474 aaKnown RBP27.3■■□□□ 1.96
SCN5A-213ENST00000491944 BEGAINQ9BUH8 593 aa27.3■■□□□ 1.96
SCN5A-213ENST00000491944 NDUFB10O96000 172 aa27.29■■□□□ 1.96
SCN5A-213ENST00000491944 HMGB1P09429 215 aaKnown RBP27.29■■□□□ 1.96
SCN5A-213ENST00000491944 CASTP20810 708 aaKnown RBP27.29■■□□□ 1.96
SCN5A-213ENST00000491944 PABPC4Q13310 644 aaKnown RBP eCLIP27.29■■□□□ 1.96
SCN5A-213ENST00000491944 BLOC1S2Q6QNY1 142 aa27.29■■□□□ 1.96
SCN5A-213ENST00000491944 JMYQ8N9B5 988 aa27.29■■□□□ 1.96
SCN5A-213ENST00000491944 CHMP4CQ96CF2 233 aa27.29■■□□□ 1.96
SCN5A-213ENST00000491944 RPAP3Q9H6T3 665 aaPredicted RBP27.29■■□□□ 1.96
SCN5A-213ENST00000491944 KAT14Q9H8E8 782 aa27.29■■□□□ 1.96
SCN5A-213ENST00000491944 UPF2Q9HAU5 1272 aaKnown RBP27.29■■□□□ 1.96
SCN5A-213ENST00000491944 ALDH1A1P00352 501 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 WTAPQ15007 396 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 SEC23AQ15436 765 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 SLFN13Q68D06 897 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 DHX32Q7L7V1 743 aaKnown RBP27.28■■□□□ 1.96
SCN5A-213ENST00000491944 GMCL1P1Q8NEA9 526 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 LRRC2Q9BYS8 371 aa27.28■■□□□ 1.96
SCN5A-213ENST00000491944 ZCCHC17Q9NP64 241 aaKnown RBP27.28■■□□□ 1.96
SCN5A-213ENST00000491944 CPA1P15085 419 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 ANAPC15P60006 121 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 TAF1CQ15572 869 aaPredicted RBP27.27■■□□□ 1.96
SCN5A-213ENST00000491944 ANKS1AQ92625 1134 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 TMEM87BQ96K49 555 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 TCEANC2Q96MN5 208 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 BACH2Q9BYV9 841 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 TANGO6Q9C0B7 1094 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 RNF186Q9NXI6 227 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 SLC45A1Q9Y2W3 748 aa27.27■■□□□ 1.96
SCN5A-213ENST00000491944 WDR46O15213 610 aaKnown RBP27.26■■□□□ 1.95
SCN5A-213ENST00000491944 TRPA1O75762 1119 aa27.26■■□□□ 1.95
SCN5A-213ENST00000491944 IRX3P78415 501 aaPredicted RBP27.26■■□□□ 1.95
SCN5A-213ENST00000491944 IGDCC4Q8TDY8 1250 aa27.26■■□□□ 1.95
SCN5A-213ENST00000491944 NUP88Q99567 741 aaPredicted RBP27.26■■□□□ 1.95
SCN5A-213ENST00000491944 MTA3Q9BTC8 594 aa27.26■■□□□ 1.95
SCN5A-213ENST00000491944 ISY1Q9ULR0 285 aaKnown RBP27.26■■□□□ 1.95
SCN5A-213ENST00000491944 WDR19Q8NEZ3 1342 aa27.26■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L15C9J2P7 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L13C9JLJ4 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L11C9JVI0 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L18D6R9N7 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L22D6RA61 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L17D6RBQ6 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L19D6RCP7 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L20D6RJB6 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 OSBPP22059 807 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 USP17L24Q0WX57 530 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 FAM83BQ5T0W9 1011 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 PNMA1Q8ND90 353 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 C22orf23Q9BZE7 217 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 GPHNQ9NQX3 736 aaPredicted RBP27.25■■□□□ 1.95
SCN5A-213ENST00000491944 WBP1LQ9NX94 342 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 PNMA3Q9UL41 463 aa27.25■■□□□ 1.95
SCN5A-213ENST00000491944 HOXA7P31268 230 aaPredicted RBP27.24■■□□□ 1.95
SCN5A-213ENST00000491944 EXOSC10Q01780 885 aaKnown RBP27.24■■□□□ 1.95
SCN5A-213ENST00000491944 PARK7Q99497 189 aaKnown RBP27.24■■□□□ 1.95
SCN5A-213ENST00000491944 ASCC2Q9H1I8 757 aaPredicted RBP27.24■■□□□ 1.95
SCN5A-213ENST00000491944 LY9Q9HBG7 655 aa27.24■■□□□ 1.95
SCN5A-213ENST00000491944 SENP2Q9HC62 589 aa27.24■■□□□ 1.95
SCN5A-213ENST00000491944 SH2B2O14492 632 aaPredicted RBP27.23■■□□□ 1.95
SCN5A-213ENST00000491944 CYP2C8P10632 490 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 RPS6KB1P23443 525 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 SLC1A4P43007 532 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 FGD1P98174 961 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 TM6SF1Q9BZW5 370 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 ZFYVE28Q9HCC9 887 aa27.23■■□□□ 1.95
SCN5A-213ENST00000491944 CYP46A1Q9Y6A2 500 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms