RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 DYNLL1P63167 89 aaKnown RBP12.14□□□□□ -0.47
SNED1-211ENST00000491761 HLTFQ14527 1009 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNED1-211ENST00000491761 TDRD12Q587J7 1177 aaKnown RBP12.14□□□□□ -0.47
SNED1-211ENST00000491761 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 IQUBQ8NA54 791 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
SNED1-211ENST00000491761 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 ERCC5P28715 1186 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 ELOA2Q8IYF1 753 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 MKNK2Q9HBH9 465 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 N4BP3O15049 544 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 ANKRD2Q9GZV1 360 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 STK32BQ9NY57 414 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 GNPATO15228 680 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 DDAH1O94760 285 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 HIBADHP31937 336 aaKnown RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 CTR9Q6PD62 1173 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 SETDB2Q96T68 719 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
SNED1-211ENST00000491761 ANKRD62A6NC57 917 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 CALML3P27482 149 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 PTPN21Q16825 1174 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 PPP2R2CQ9Y2T4 447 aa12.13□□□□□ -0.47
SNED1-211ENST00000491761 SYNRGQ9UMZ2 1314 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 NTSR2O95665 410 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 CCDC175P0C221 793 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 IDEP14735 1019 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 ADKP55263 362 aaKnown RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 KCND1Q9NSA2 647 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 AATFQ9NY61 560 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNED1-211ENST00000491761 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 RXRBP28702 533 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 MCM7P33993 719 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 TOB1P50616 345 aaPredicted RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 BSDC1Q9NW68 430 aaPredicted RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 RMND1Q9NWS8 449 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 VPS18Q9P253 973 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 STX10O60499 249 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 SLFN14P0C7P3 912 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 SPAG1Q07617 926 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 SPA17Q15506 151 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 MCM9Q9NXL9 1143 aa12.12□□□□□ -0.47
SNED1-211ENST00000491761 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
SNED1-211ENST00000491761 SEMA3EO15041 775 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 SPATA1Q5VX52 437 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 CLEC4GQ6UXB4 293 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 IGSF22Q8N9C0 903 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 NKX2-3Q8TAU0 364 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 GBP3Q9H0R5 595 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
SNED1-211ENST00000491761 TJP1Q07157 1748 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
SNED1-211ENST00000491761 CAPZA3Q96KX2 299 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 GNAQP50148 359 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 GRIN1Q05586 938 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 MORC3Q14149 939 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 RBM26Q5T8P6 1007 aaKnown RBP12.11□□□□□ -0.47
SNED1-211ENST00000491761 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
SNED1-211ENST00000491761 TMOD2Q9NZR1 351 aa12.11□□□□□ -0.47
SNED1-211ENST00000491761 THRAP3Q9Y2W1 955 aaKnown RBP12.11□□□□□ -0.47
SNED1-211ENST00000491761 MSL1Q68DK7 614 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 CARD6Q9BX69 1037 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 LUC7LQ9NQ29 371 aaKnown RBP12.1□□□□□ -0.47
SNED1-211ENST00000491761 ANAPC4Q9UJX5 808 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 PTGDRQ13258 359 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 FOXP4Q8IVH2 680 aaPredicted RBP12.1□□□□□ -0.47
SNED1-211ENST00000491761 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
SNED1-211ENST00000491761 SCG2P13521 617 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms