RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ATP2B1P20020 1258 aa21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 ERVK-24P63145 666 aa21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 SCARF1Q14162 830 aa21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 DNAJC21Q5F1R6 531 aaKnown RBP21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 CT47A1Q5JQC4 288 aaPredicted RBP21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 ZNF579Q8NAF0 562 aaKnown RBP21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 MYH8P13535 1937 aa21.87■■□□□ 1.09
SNAPC3-206ENST00000490969 CD44P16070 742 aaKnown RBP21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 ZAP70P43403 619 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 CUL4BQ13620 913 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 NFXL1Q6ZNB6 911 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 XAGE2Q96GT9 111 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 ITIH6Q6UXX5 1313 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 STK36Q9NRP7 1315 aa21.86■■□□□ 1.09
SNAPC3-206ENST00000490969 MMP1P03956 469 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 AKAP17AQ02040 695 aaKnown RBP21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 SSRP1Q08945 709 aaKnown RBP21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 SAFBQ15424 915 aaKnown RBP eCLIP21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 RILPL1Q5EBL4 403 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 TAF7LQ5H9L4 462 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 DIS3L2Q8IYB7 885 aaKnown RBP21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 DRC1Q96MC2 740 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 HPCAL4Q9UM19 191 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 B4E1Z4 1266 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 USP49Q70CQ1 688 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 TADA2BQ86TJ2 420 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 ZBTB38Q8NAP3 1195 aaPredicted RBP21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 TMEM87BQ96K49 555 aa21.85■■□□□ 1.09
SNAPC3-206ENST00000490969 PCCAP05165 728 aaPredicted RBP21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 USP14P54578 494 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 IGDCC4Q8TDY8 1250 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 PCDHB6Q9Y5E3 794 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 SRPRBQ9Y5M8 271 aaKnown RBP21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 SEMA3EO15041 775 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 FMNL1O95466 1100 aaPredicted RBP21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 DEF6Q9H4E7 631 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 LY9Q9HBG7 655 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 ABHD10Q9NUJ1 306 aa21.84■■□□□ 1.09
SNAPC3-206ENST00000490969 A0A087WUV0 522 aaPredicted RBP21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 MAP9Q49MG5 647 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 CYP26C1Q6V0L0 522 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 WASF1Q92558 559 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 CSRNP2Q9H175 543 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 TOMM22Q9NS69 142 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 KCNJ14Q9UNX9 436 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 MYH7P12883 1935 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 CAMTA2O94983 1202 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 PI16Q6UXB8 463 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 SGMS1Q86VZ5 419 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 AMIGO3Q86WK7 504 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 RNF216Q9NWF9 866 aaPredicted RBP21.83■■□□□ 1.09
SNAPC3-206ENST00000490969 ZC3H4Q9UPT8 1303 aaKnown RBP21.83■■□□□ 1.08
SNAPC3-206ENST00000490969 MYO5AQ9Y4I1 1855 aaKnown RBP21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 MCM3P25205 808 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 GUCY1A2P33402 732 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 SUGP1Q8IWZ8 645 aaKnown RBP21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 ZNF34Q8IZ26 560 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 SMARCC1Q92922 1105 aaPredicted RBP21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 SLF1Q9BQI6 1058 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 BTAF1O14981 1849 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 TMEM67Q5HYA8 995 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 TRAPPC11Q7Z392 1133 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 FOXP1Q9H334 677 aaPredicted RBP21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 TRMT112Q9UI30 125 aaKnown RBP21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 CDHR2Q9BYE9 1310 aa21.82■■□□□ 1.08
SNAPC3-206ENST00000490969 ERVV-1B6SEH8 477 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 CCT6AP40227 531 aaKnown RBP21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 AFMP43652 599 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 NCAPGQ9BPX3 1015 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 RNF225M0QZC1 329 aaPredicted RBP21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 SUSD4Q5VX71 490 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 MMS22LQ6ZRQ5 1243 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 COG1Q8WTW3 980 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 RIN2Q8WYP3 895 aaPredicted RBP21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 FAM107BQ9H098 131 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 ATRNO75882 1429 aa21.81■■□□□ 1.08
SNAPC3-206ENST00000490969 APPP05067 770 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 COL5A3P25940 1745 aaPredicted RBP21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 CDC25AP30304 524 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 STIM1Q13586 685 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 SKIDA1Q1XH10 827 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 SMYD4Q8IYR2 804 aaPredicted RBP21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 CEP131Q9UPN4 1083 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 SLC12A7Q9Y666 1083 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 PPP1R3GB7ZBB8 358 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 IFNAR1P17181 557 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 CASP1P29466 404 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 MICALL1Q8N3F8 863 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 NUP88Q99567 741 aaPredicted RBP21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.8■■□□□ 1.083e-8■■□□□ 12.6
SNAPC3-206ENST00000490969 GREM2Q9H772 168 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 ABCC12Q96J65 1359 aa21.8■■□□□ 1.08
SNAPC3-206ENST00000490969 SHOX2O60902 331 aaPredicted RBP21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 NR5A1Q13285 461 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 GUCA1BQ9UMX6 200 aa21.79■■□□□ 1.08
SNAPC3-206ENST00000490969 RREB1Q92766 1687 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms