RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 APPP05067 770 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 ATP2B2Q01814 1243 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 WDR78Q5VTH9 848 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 STK11IPQ8N1F8 1099 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 TRIB2Q92519 343 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 LPAR1Q92633 364 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 DEFB118Q96PH6 123 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.86■■□□□ 1.09
SBDS-204ENST00000490953 EPB41L4AQ9HCS5 686 aaPredicted RBP21.86■■□□□ 1.09
SBDS-204ENST00000490953 PAK6Q9NQU5 681 aaPredicted RBP21.86■■□□□ 1.09
SBDS-204ENST00000490953 BTBD7Q9P203 1132 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 TMX2Q9Y320 296 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 RLFQ13129 1914 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 ROBO3Q96MS0 1386 aa21.86■■□□□ 1.09
SBDS-204ENST00000490953 PARP14Q460N5 1801 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 AAMPQ13685 434 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 COG2Q14746 738 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 KIAA1755Q5JYT7 1200 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 SIAH1Q8IUQ4 282 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 SPICE1Q8N0Z3 855 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 SEC62Q99442 399 aaKnown RBP21.85■■□□□ 1.09
SBDS-204ENST00000490953 VCPKMTQ9H867 229 aa21.85■■□□□ 1.09
SBDS-204ENST00000490953 MKI67P46013 3256 aaKnown RBP21.85■■□□□ 1.09
SBDS-204ENST00000490953 FARP2O94887 1054 aaPredicted RBP21.84■■□□□ 1.09
SBDS-204ENST00000490953 XRCC5P13010 732 aaKnown RBP21.84■■□□□ 1.09
SBDS-204ENST00000490953 EEF2P13639 858 aaKnown RBP21.84■■□□□ 1.09
SBDS-204ENST00000490953 RGS2P41220 211 aa21.84■■□□□ 1.09
SBDS-204ENST00000490953 TRIM32Q13049 653 aa21.84■■□□□ 1.09
SBDS-204ENST00000490953 MORN1Q5T089 497 aa21.84■■□□□ 1.09
SBDS-204ENST00000490953 KANSL2Q9H9L4 492 aa21.84■■□□□ 1.09
SBDS-204ENST00000490953 MKNK2Q9HBH9 465 aa21.84■■□□□ 1.09
SBDS-204ENST00000490953 TFRCP02786 760 aaKnown RBP21.83■■□□□ 1.09
SBDS-204ENST00000490953 ZKSCAN1P17029 563 aaPredicted RBP21.83■■□□□ 1.09
SBDS-204ENST00000490953 ZMYM1Q5SVZ6 1142 aa21.83■■□□□ 1.09
SBDS-204ENST00000490953 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
SBDS-204ENST00000490953 USP6NLQ92738 828 aa21.83■■□□□ 1.09
SBDS-204ENST00000490953 APBA2Q99767 749 aa21.83■■□□□ 1.09
SBDS-204ENST00000490953 HMX1Q9NP08 348 aaPredicted RBP21.83■■□□□ 1.09
SBDS-204ENST00000490953 HOXC10Q9NYD6 342 aa21.83■■□□□ 1.09
SBDS-204ENST00000490953 RPTORQ8N122 1335 aa21.82■■□□□ 1.08
SBDS-204ENST00000490953 PATL2C9JE40 543 aaKnown RBP21.82■■□□□ 1.08
SBDS-204ENST00000490953 WDR46O15213 610 aaKnown RBP21.82■■□□□ 1.08
SBDS-204ENST00000490953 FLOT1O75955 427 aa21.82■■□□□ 1.08
SBDS-204ENST00000490953 RASA1P20936 1047 aa21.82■■□□□ 1.08
SBDS-204ENST00000490953 NACAP1Q9BZK3 213 aa21.82■■□□□ 1.08
SBDS-204ENST00000490953 IVNS1ABPQ9Y6Y0 642 aa21.82■■□□□ 1.08
SBDS-204ENST00000490953 RAD21O60216 631 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 CAPN2P17655 700 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 PDE1AP54750 535 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 MAP2K5Q13163 448 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 SAMD1Q6SPF0 538 aaPredicted RBP21.81■■□□□ 1.08
SBDS-204ENST00000490953 UBE2Q1Q7Z7E8 422 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 IFNL3Q8IZI9 196 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 GOPCQ9HD26 462 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 STAP2Q9UGK3 403 aa21.81■■□□□ 1.08
SBDS-204ENST00000490953 COL11A1P12107 1806 aaPredicted RBP21.8■■□□□ 1.08
SBDS-204ENST00000490953 MYH4Q9Y623 1939 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 SLC15A5A6NIM6 579 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 PRKAR2AP13861 404 aaKnown RBP21.8■■□□□ 1.08
SBDS-204ENST00000490953 PTPREP23469 700 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 DSG3P32926 999 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 CCL14Q16627 93 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 MB21D1Q8N884 522 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 EVI5LQ96CN4 794 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.8■■□□□ 1.08
SBDS-204ENST00000490953 LNPKQ9C0E8 428 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 CRISPLD2Q9H0B8 497 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 NAPBQ9H115 298 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 RWDD1Q9H446 243 aaPredicted RBP21.8■■□□□ 1.08
SBDS-204ENST00000490953 ZNF287Q9HBT7 754 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 ZNF236Q9UL36 1845 aa21.8■■□□□ 1.08
SBDS-204ENST00000490953 MAP3K21Q5TCX8 1036 aa21.79■■□□□ 1.08
SBDS-204ENST00000490953 DPF3Q92784 378 aa21.79■■□□□ 1.08
SBDS-204ENST00000490953 ATG4CQ96DT6 458 aa21.79■■□□□ 1.08
SBDS-204ENST00000490953 MOV10L1Q9BXT6 1211 aaKnown RBP21.79■■□□□ 1.08
SBDS-204ENST00000490953 SPATC1LQ9H0A9 340 aa21.79■■□□□ 1.08
SBDS-204ENST00000490953 PRDM1O75626 825 aa21.78■■□□□ 1.08
SBDS-204ENST00000490953 GRB14Q14449 540 aa21.78■■□□□ 1.08
SBDS-204ENST00000490953 PLS1Q14651 629 aa21.78■■□□□ 1.08
SBDS-204ENST00000490953 CCDC129Q6ZRS4 1044 aa21.78■■□□□ 1.08
SBDS-204ENST00000490953 ZNF444Q8N0Y2 327 aaPredicted RBP21.78■■□□□ 1.08
SBDS-204ENST00000490953 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
SBDS-204ENST00000490953 CACNB2Q08289 660 aaPredicted RBP21.77■■□□□ 1.08
SBDS-204ENST00000490953 B4GALNT3Q6L9W6 998 aa21.77■■□□□ 1.08
SBDS-204ENST00000490953 SMC5Q8IY18 1101 aa21.77■■□□□ 1.08
SBDS-204ENST00000490953 NYAP2Q9P242 653 aa21.77■■□□□ 1.08
SBDS-204ENST00000490953 SLC3A2P08195 630 aaKnown RBP21.76■■□□□ 1.07
SBDS-204ENST00000490953 ERCC3P19447 782 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 PDE4BQ07343 736 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 PPARAQ07869 468 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 FAM83BQ5T0W9 1011 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 SHCBP1Q8NEM2 672 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 FBXO28Q9NVF7 368 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 FRMPD3Q5JV73 1810 aa21.76■■□□□ 1.07
SBDS-204ENST00000490953 H0YGN5 161 aa21.75■■□□□ 1.07
SBDS-204ENST00000490953 NCAPG2Q86XI2 1143 aa21.75■■□□□ 1.07
SBDS-204ENST00000490953 ANKLE1Q8NAG6 615 aa21.75■■□□□ 1.07
SBDS-204ENST00000490953 IGKV6D-41A0A0C4DH26 115 aa21.74■■□□□ 1.07
SBDS-204ENST00000490953 SLC34A2O95436 690 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms