RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 PROCA1Q8NCQ7 364 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-210ENST00000490081 GMCL1P1Q8NEA9 526 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 LPAR1Q92633 364 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 TBC1D32Q96NH3 1257 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 UBAC1Q9BSL1 405 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 ZCCHC17Q9NP64 241 aaKnown RBP14.68□□□□□ -0.06
HDAC1-210ENST00000490081 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 TOP1P11387 765 aaKnown RBP14.67□□□□□ -0.06
HDAC1-210ENST00000490081 CETPP11597 493 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 RPS6KB1P23443 525 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 MOGSQ13724 837 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 USP17L2Q6R6M4 530 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 RUFY3Q7L099 469 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 FASTKD5Q7L8L6 764 aaKnown RBP14.67□□□□□ -0.06
HDAC1-210ENST00000490081 ENAHQ8N8S7 591 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-210ENST00000490081 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 JAKMIP1Q96N16 626 aaKnown RBP14.67□□□□□ -0.06
HDAC1-210ENST00000490081 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 SLC45A1Q9Y2W3 748 aa14.67□□□□□ -0.06
HDAC1-210ENST00000490081 LOC285556D6RIA3 1793 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 ERICH2A1L162 156 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 PRC1O43663 620 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 NMT2O60551 498 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 EVCP57679 992 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 PAXIP1Q6ZW49 1069 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-210ENST00000490081 SGMS1Q86VZ5 419 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 ACER1Q8TDN7 264 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 MAP3K14Q99558 947 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 KIF2CQ99661 725 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 TMEM47Q9BQJ4 181 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 VCPKMTQ9H867 229 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 CYP46A1Q9Y6A2 500 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 TNKSO95271 1327 aa14.66□□□□□ -0.06
HDAC1-210ENST00000490081 IFIT3O14879 490 aaKnown RBP14.65□□□□□ -0.06
HDAC1-210ENST00000490081 CASTP20810 708 aaKnown RBP14.65□□□□□ -0.06
HDAC1-210ENST00000490081 HOXA7P31268 230 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-210ENST00000490081 GRM1Q13255 1194 aa14.65□□□□□ -0.06
HDAC1-210ENST00000490081 GOPCQ9HD26 462 aa14.65□□□□□ -0.06
HDAC1-210ENST00000490081 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-210ENST00000490081 TRIM75PA6NK02 468 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 F5H6K3 240 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 SH2B2O14492 632 aaPredicted RBP14.64□□□□□ -0.07
HDAC1-210ENST00000490081 PLA2G6O60733 806 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 RCAN1P53805 252 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 KLRC3Q07444 240 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 SREBF2Q12772 1141 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 MTMR2Q13614 643 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 WTAPQ15007 396 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 IFIT1BQ5T764 474 aaKnown RBP14.64□□□□□ -0.07
HDAC1-210ENST00000490081 ANKRD23Q86SG2 305 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
HDAC1-210ENST00000490081 GMCL1Q96IK5 515 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 LY9Q9HBG7 655 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 TMOD4Q9NZQ9 345 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 STX8Q9UNK0 236 aa14.64□□□□□ -0.07
HDAC1-210ENST00000490081 WDR46O15213 610 aaKnown RBP14.63□□□□□ -0.07
HDAC1-210ENST00000490081 COL9A3Q14050 684 aaPredicted RBP14.63□□□□□ -0.07
HDAC1-210ENST00000490081 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 GPAT2Q6NUI2 795 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 CLEC10AQ8IUN9 316 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 ZIC5Q96T25 663 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 FEZ1Q99689 392 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 ZKSCAN3Q9BRR0 538 aa14.63□□□□□ -0.07
HDAC1-210ENST00000490081 CCL15-CCL14A0A0B4J2E2 113 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 ALDH1A1P00352 501 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 HMGCS2P54868 508 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 KIF23Q02241 960 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-210ENST00000490081 TROAPQ12815 778 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 PABPC4Q13310 644 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC1-210ENST00000490081 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 RABEP1Q15276 862 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 CCL15Q16663 113 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 PNMA1Q8ND90 353 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 BRI3BPQ8WY22 251 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 PTPN18Q99952 460 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 CFHR5Q9BXR6 569 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 AGTPBP1Q9UPW5 1226 aa14.62□□□□□ -0.07
HDAC1-210ENST00000490081 DDAH1O94760 285 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 NDUFB10O96000 172 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 CALM1P0DP23 149 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 CALM2P0DP24 149 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 CALM3P0DP25 149 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 ANKRD1Q15327 319 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 CATSPERGQ6ZRH7 1159 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 CHST3Q7LGC8 479 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 PDRG1Q9NUG6 133 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 MYPNQ86TC9 1320 aa14.61□□□□□ -0.07
HDAC1-210ENST00000490081 RLFQ13129 1914 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 PARP14Q460N5 1801 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
HDAC1-210ENST00000490081 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms