RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 AOC3Q16853 763 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 Q6ZUG5 572 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.62
NOD1-208ENST00000489614 BORCS6Q96GS4 357 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.62
NOD1-208ENST00000489614 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 GTF2IP78347 998 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 DHX8Q14562 1220 aaKnown RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 APOBEC3HQ6NTF7 200 aaKnown RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 SUGP1Q8IWZ8 645 aaKnown RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 NCOA7Q8NI08 942 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 UBXN4Q92575 508 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
NOD1-208ENST00000489614 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 ATF5Q9Y2D1 282 aaPredicted RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 ZRANB2O95218 330 aaKnown RBP eCLIP11.2□□□□□ -0.62
NOD1-208ENST00000489614 CTDNEP1O95476 244 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 POLD1P28340 1107 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 C12orf60Q5U649 245 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 ZNF513Q8N8E2 541 aaPredicted RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 JAG2Q9Y219 1238 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 WDR90Q96KV7 1748 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 ATRNL1Q5VV63 1379 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 CCDC196A0A1B0GTZ2 297 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 SKILP12757 684 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
NOD1-208ENST00000489614 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 CEP89Q96ST8 783 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 MXD3Q9BW11 206 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
NOD1-208ENST00000489614 DOCK1Q14185 1865 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 FLT1P17948 1338 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 LDHCP07864 332 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 BTDP43251 543 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 SSR1P43307 286 aaKnown RBP11.19□□□□□ -0.62
NOD1-208ENST00000489614 RBM5P52756 815 aaKnown RBP eCLIP11.19□□□□□ -0.62
NOD1-208ENST00000489614 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 GABPAQ06546 454 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 FILIP1Q7Z7B0 1213 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
NOD1-208ENST00000489614 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
NOD1-208ENST00000489614 CRNKL1Q9BZJ0 848 aaKnown RBP11.19□□□□□ -0.62
NOD1-208ENST00000489614 NAPBQ9H115 298 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 LOC285556D6RIA3 1793 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
NOD1-208ENST00000489614 LIFRP42702 1097 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 RCAN1P53805 252 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 HAND2P61296 217 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 ANKS1AQ92625 1134 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 VPS18Q9P253 973 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 SERPINA10Q9UK55 444 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
NOD1-208ENST00000489614 SMC2O95347 1197 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 IVLP07476 585 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 TPM1P09493 284 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 CCDC192P0DO97 292 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 CKAP2LQ8IYA6 745 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 JPH2Q9BR39 696 aaPredicted RBP11.18□□□□□ -0.62
NOD1-208ENST00000489614 INCENPQ9NQS7 918 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 PAX7P23759 505 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 PDIA3P30101 505 aaKnown RBP11.18□□□□□ -0.62
NOD1-208ENST00000489614 CORO7P57737 925 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 SCRN1Q12765 414 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 GIMAP7Q8NHV1 300 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 PIK3R5Q8WYR1 880 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 NACAP1Q9BZK3 213 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
NOD1-208ENST00000489614 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 MYO3BQ8WXR4 1341 aa11.18□□□□□ -0.62
NOD1-208ENST00000489614 PRC1O43663 620 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 IARSP41252 1262 aaKnown RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 LLPHQ9BRT6 129 aaKnown RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 FUCA2Q9BTY2 467 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 KRT23Q9C075 422 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 GPHNQ9NQX3 736 aaPredicted RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 TCP11L1Q9NUJ3 509 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
NOD1-208ENST00000489614 ISM2Q6H9L7 571 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 NLGN2Q8NFZ4 835 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 EXOC4Q96A65 974 aa11.17□□□□□ -0.62
NOD1-208ENST00000489614 ZSCAN16Q9H4T2 348 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms