RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 B4E1Z4 1266 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 BTBD19C9JJ37 291 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 KDM4AO75164 1064 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 MCCP23508 829 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 TSGA10IPQ3SY00 556 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 SIAH1Q8IUQ4 282 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 TTC14Q96N46 770 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 VCPKMTQ9H867 229 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 RNF186Q9NXI6 227 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
SMIM11A-206ENST00000489469 HSPA4P34932 840 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 NOVP48745 357 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 IL17RBQ9NRM6 502 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 STX8Q9UNK0 236 aa18.25■□□□□ 0.51
SMIM11A-206ENST00000489469 PDHXO00330 501 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 SART3Q15020 963 aaKnown RBP18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 TAF1CQ15572 869 aaPredicted RBP18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 ZYXQ15942 572 aaKnown RBP18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 PARK7Q99497 189 aaKnown RBP18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 UBAC1Q9BSL1 405 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 MTA3Q9BTC8 594 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 ZFYVE28Q9HCC9 887 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
SMIM11A-206ENST00000489469 TRPA1O75762 1119 aa18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 OSBPP22059 807 aa18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 HOXA7P31268 230 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 STOX1Q6ZVD7 989 aa18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 KCNB2Q92953 911 aa18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 ZSCAN10Q96SZ4 725 aaPredicted RBP18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 USP26Q9BXU7 913 aa18.23■□□□□ 0.51
SMIM11A-206ENST00000489469 PCNTO95613 3336 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 PARP14Q460N5 1801 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 ERICH2A1L162 156 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L15C9J2P7 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L13C9JLJ4 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L11C9JVI0 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L18D6R9N7 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L22D6RA61 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L17D6RBQ6 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L19D6RCP7 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L20D6RJB6 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 NMT2O60551 498 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 VCAM1P19320 739 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 USP17L24Q0WX57 530 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
SMIM11A-206ENST00000489469 F5H6K3 240 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 MCM5P33992 734 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 KLRC3Q07444 240 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 C8orf34Q49A92 452 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 NOM1Q5C9Z4 860 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 MB21D2Q8IYB1 491 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 GTF3C2Q8WUA4 911 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 TAF6LQ9Y6J9 622 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 TNKSO95271 1327 aa18.21■□□□□ 0.51
SMIM11A-206ENST00000489469 CRHR2Q13324 411 aa18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 DGKZQ13574 1117 aa18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 NEK1Q96PY6 1258 aa18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 ZKSCAN3Q9BRR0 538 aa18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
SMIM11A-206ENST00000489469 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 RAD21O60216 631 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 TLR2O60603 784 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 NDUFB10O96000 172 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 PSMA5P28066 241 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 CTCFP49711 727 aaPredicted RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 IFIT1BQ5T764 474 aaKnown RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 CATSPERGQ6ZRH7 1159 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 CYB5R4Q7L1T6 521 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 SPICE1Q8N0Z3 855 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 GMCL1Q96IK5 515 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 TMEM47Q9BQJ4 181 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 KAT14Q9H8E8 782 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 RLFQ13129 1914 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 WDR19Q8NEZ3 1342 aa18.19■□□□□ 0.5
SMIM11A-206ENST00000489469 TBC1D8O95759 1140 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 PRR29P0C7W0 189 aa18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 GCLCP48506 637 aaPredicted RBP18.18■□□□□ 0.5
SMIM11A-206ENST00000489469 SLFN13Q68D06 897 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms