RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	ANO10	Q9NW15	660 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	CCDC39	Q9UFE4	941 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	TTF2	Q9UNY4	1162 aa	Known RBP	12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	MYH2	Q9UKX2	1941 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	CNTNAP5	Q8WYK1	1306 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	TPM3	P06753	285 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	TOP1	P11387	765 aa	Known RBP	12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	SCG2	P13521	617 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	TRAPPC10	P48553	1259 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	STX1A	Q16623	288 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	CCDC82	Q8N4S0	544 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	SRBD1	Q8N5C6	995 aa	Known RBP	12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	KRI1	Q8N9T8	703 aa	Known RBP	12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	PSMD1	Q99460	953 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	NAT10	Q9H0A0	1025 aa	Known RBP	12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	GOLPH3L	Q9H4A5	285 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	USP40	Q9NVE5	1235 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	HOOK1	Q9UJC3	728 aa	Known RBP	12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	MRVI1	Q9Y6F6	885 aa		12.46	□□□□□ -0.41
ITSN1-231	ENST00000489261	COL4A5	P29400	1685 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	TOMM70	O94826	608 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZNF202	O95125	648 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	PLEKHA8P1	O95397	391 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	HLA-DOA	P06340	250 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	PTPRE	P23469	700 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	DOK7	Q18PE1	504 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	SLC51A	Q86UW1	340 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	CKAP2L	Q8IYA6	745 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	FBXW7	Q969H0	707 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	CCDC34	Q96HJ3	373 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZDHHC15	Q96MV8	337 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	DHX36	Q9H2U1	1008 aa	Known RBP	12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	FAM13B	Q9NYF5	915 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	SAP30BP	Q9UHR5	308 aa	Known RBP	12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	KCNJ14	Q9UNX9	436 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	HPSE	Q9Y251	543 aa		12.45	□□□□□ -0.42
ITSN1-231	ENST00000489261	PLIN4	Q96Q06	1357 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261		A0A1B0GVL5	298 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	USP17L3	A6NCW0	530 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	USP17L4	A6NCW7	530 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	PALM3	A6NDB9	673 aa	Predicted RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	TRIM75P	A6NK02	468 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	ESPN	B1AK53	854 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	NMT2	O60551	498 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	SYK	P43405	635 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	NDUFA8	P51970	172 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	GABPA	Q06546	454 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZRSR1	Q15695	479 aa	Known RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	RESP18	Q5W5W9	173 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	USP17L1	Q7RTZ2	530 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	CERS5	Q8N5B7	392 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	CCDC148	Q8NFR7	591 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	RBM46	Q8TBY0	533 aa	Known RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	CCDC17	Q96LX7	622 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	TMEM47	Q9BQJ4	181 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	EHD4	Q9H223	541 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	RRAGC	Q9HB90	399 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	SERPINA10	Q9UK55	444 aa		12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	SRPRB	Q9Y5M8	271 aa	Known RBP	12.44	□□□□□ -0.42
ITSN1-231	ENST00000489261	NAV1	Q8NEY1	1877 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	POTEC	B2RU33	542 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	WDHD1	O75717	1129 aa	Predicted RBP	12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	PFKFB1	P16118	471 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	CRK	P46108	304 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZNF165	P49910	485 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	TOB1	P50616	345 aa	Predicted RBP	12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	NLRP5	P59047	1200 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	KIAA2012	Q0VF49	1180 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	ANO6	Q4KMQ2	910 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	DPY19L2	Q6NUT2	758 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	KANK3	Q6NY19	840 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZSCAN30	Q86W11	494 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	CMTR1	Q8N1G2	835 aa	Known RBP	12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	FERMT2	Q96AC1	680 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	PYM1	Q9BRP8	204 aa	Known RBP	12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	SPZ1	Q9BXG8	430 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	CABP5	Q9NP86	173 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	VPS54	Q9P1Q0	977 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	KIAA1468	Q9P260	1216 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	USP25	Q9UHP3	1055 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	MAD2L2	Q9UI95	211 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	ADAMTSL1	Q8N6G6	1762 aa		12.43	□□□□□ -0.42
ITSN1-231	ENST00000489261	hCG_1984214	I3L0E3	225 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	ECE2	O60344	883 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	PARP1	P09874	1014 aa	Known RBP	12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	HSPA6	P17066	643 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	MARCKS	P29966	332 aa	Predicted RBP	12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	EVX2	Q03828	476 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	DACT2	Q5SW24	774 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	CDC42EP5	Q6NZY7	148 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	ZNF713	Q8N859	430 aa	Predicted RBP	12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	DAGLB	Q8NCG7	672 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	TNFRSF25	Q93038	417 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	BPIFA3	Q9BQP9	254 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	IDI2	Q9BXS1	227 aa		12.42	□□□□□ -0.42
ITSN1-231	ENST00000489261	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms