RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 RNF34Q969K3 372 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 VGLL3A8MV65 326 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 ABCB4P21439 1286 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 ARHGEF10LQ9HCE6 1279 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 DCUN1D2Q6PH85 259 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 LMNTD2Q8IXW0 634 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 ZNF274Q96GC6 653 aaPredicted RBP19.5■□□□□ 0.71
NPHP4-209ENST00000489180 SH2D4AQ9H788 454 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 NRBP1Q9UHY1 535 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 CRCPO75575 148 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 DNAJC10Q8IXB1 793 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 PCDHB13Q9Y5F0 798 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 SMCO2A6NFE2 343 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 PFKFB2O60825 505 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 CFBP00751 764 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 ATP1A2P50993 1020 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 DENND2CQ68D51 928 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 CEP128Q6ZU80 1094 aa19.5■□□□□ 0.71
NPHP4-209ENST00000489180 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
NPHP4-209ENST00000489180 TBC1D8O95759 1140 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 GOLGA8FQ08AF8 430 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 GOLGA8DPQ0D2H9 430 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 PTPN21Q16825 1174 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 MROH5Q6ZUA9 1318 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 CTNNA1P35221 906 aaKnown RBP19.49■□□□□ 0.71
NPHP4-209ENST00000489180 TECP42680 631 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 PSMD6Q15008 389 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 WHAMMP3Q1A5X7 153 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 MTMR3Q13615 1198 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 BRD3Q15059 726 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 GINS2Q9Y248 185 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 STK38LQ9Y2H1 464 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 KCNK3O14649 394 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 DAPK3O43293 454 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 CPXCR1Q8N123 301 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 REXO1Q8N1G1 1221 aaKnown RBP19.49■□□□□ 0.71
NPHP4-209ENST00000489180 OR8K1Q8NGG5 319 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 SSH3Q8TE77 659 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 VPS37BQ9H9H4 285 aa19.49■□□□□ 0.71
NPHP4-209ENST00000489180 A6NNZ2 444 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 GAS8O95995 478 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 TUBB8Q3ZCM7 444 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 BCRP11274 1271 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 PPP2R5BQ15173 497 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 TPH2Q8IWU9 490 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 HSPD1P10809 573 aaKnown RBP19.48■□□□□ 0.71
NPHP4-209ENST00000489180 SDCCAG8Q86SQ7 713 aaPredicted RBP19.48■□□□□ 0.71
NPHP4-209ENST00000489180 RPUSD2Q8IZ73 545 aaKnown RBP19.48■□□□□ 0.71
NPHP4-209ENST00000489180 WDR66Q8TBY9 1149 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 BAIAP2L1Q9UHR4 511 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 CCDC62Q6P9F0 684 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 KSR1Q8IVT5 923 aa19.48■□□□□ 0.71
NPHP4-209ENST00000489180 KIF24Q5T7B8 1368 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 CCDC51Q96ER9 411 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 WDR62O43379 1518 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 SDR42E1Q8WUS8 393 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 FAM184BQ9ULE4 1060 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 CCT6BQ92526 530 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 PLCB1Q9NQ66 1216 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 CYP2J2P51589 502 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 ADCK5Q3MIX3 580 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 MKRN1Q9UHC7 482 aaKnown RBP19.47■□□□□ 0.71
NPHP4-209ENST00000489180 CCNL1Q9UK58 526 aaPredicted RBP19.47■□□□□ 0.71
NPHP4-209ENST00000489180 ADAT2Q7Z6V5 191 aaKnown RBP19.47■□□□□ 0.71
NPHP4-209ENST00000489180 ZSCAN10Q96SZ4 725 aaPredicted RBP19.47■□□□□ 0.71
NPHP4-209ENST00000489180 FEZ2Q9UHY8 353 aaPredicted RBP19.47■□□□□ 0.71
NPHP4-209ENST00000489180 AMFRQ9UKV5 643 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
NPHP4-209ENST00000489180 MAST1Q9Y2H9 1570 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 GMNNO75496 209 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 CD2BP2O95400 341 aaKnown RBP19.46■□□□□ 0.71
NPHP4-209ENST00000489180 KRT19P08727 400 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 SCRN1Q12765 414 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 TTC19Q6DKK2 380 aaPredicted RBP19.46■□□□□ 0.71
NPHP4-209ENST00000489180 KIAA0232Q92628 1395 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 ZMYM6O95789 1325 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 CD19P15391 556 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 IFNL3Q8IZI9 196 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 GPKOWQ92917 476 aaPredicted RBP eCLIP19.46■□□□□ 0.71
NPHP4-209ENST00000489180 GJA3Q9Y6H8 435 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 RGS12O14924 1447 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 FRMPD2Q68DX3 1309 aaPredicted RBP19.46■□□□□ 0.71
NPHP4-209ENST00000489180 USP17L12C9JPN9 530 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 USP17L21D6R901 530 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 CASC4Q6P4E1 433 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 GPBP1Q86WP2 473 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 TRIM58Q8NG06 486 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 TACO1Q9BSH4 297 aaKnown RBP19.46■□□□□ 0.71
NPHP4-209ENST00000489180 CAPN7Q9Y6W3 813 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 PTPRTO14522 1441 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 BTBD18B2RXH4 712 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 CMA1P23946 247 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 LZTS2Q9BRK4 669 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 GLT8D2Q9H1C3 349 aa19.46■□□□□ 0.71
NPHP4-209ENST00000489180 DPH5Q9H2P9 285 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms