RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MYH1P12882 1939 aa11.62□□□□□ -0.55
USP11-211ENST00000489111 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 IQCA1LA6NCM1 817 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 RAD21O60216 631 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
USP11-211ENST00000489111 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
USP11-211ENST00000489111 XBP1P17861 261 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 PTMSP20962 102 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 MCM4P33991 863 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 GNL2Q13823 731 aaKnown RBP11.61□□□□□ -0.55
USP11-211ENST00000489111 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 ASPRV1Q53RT3 343 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 CLEC17AQ6ZS10 378 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 DCPSQ96C86 337 aaKnown RBP11.61□□□□□ -0.55
USP11-211ENST00000489111 TEPSINQ96N21 525 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 ARHGEF10LQ9HCE6 1279 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 PGAP2Q9UHJ9 254 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 ZBTB21Q9ULJ3 1066 aa11.61□□□□□ -0.55
USP11-211ENST00000489111 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 GLTPD2A6NH11 291 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 USP17L5A8MUK1 530 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 HIRAP54198 1017 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 FUT2Q10981 343 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 SAFBQ15424 915 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP11-211ENST00000489111 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 USP50Q70EL3 339 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 SULF1Q8IWU6 871 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 SRBD1Q8N5C6 995 aaKnown RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 FBXO18Q8NFZ0 1043 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 ZNF341Q9BYN7 854 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 ZSCAN16Q9H4T2 348 aaPredicted RBP11.6□□□□□ -0.55
USP11-211ENST00000489111 SH2D4AQ9H788 454 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
USP11-211ENST00000489111 PALM3A6NDB9 673 aaPredicted RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 KLRF2D3W0D1 207 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 ASNSP08243 561 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 PDHBP11177 359 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 GUCY1A2P33402 732 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 EPHX2P34913 555 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 CAP2P40123 477 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 RESTQ13127 1097 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 RRP1BQ14684 758 aaKnown RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 SUPT20HL1Q3ZLR7 823 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 GPATCH4Q5T3I0 446 aaKnown RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 NBPF12Q5TAG4 269 aaPredicted RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 KRT40Q6A162 431 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 STAG2Q8N3U4 1231 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 MKL1Q969V6 931 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 SPZ1Q9BXG8 430 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 GINM1Q9NU53 330 aa11.59□□□□□ -0.55
USP11-211ENST00000489111 SEC63Q9UGP8 760 aaKnown RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
USP11-211ENST00000489111 SIPA1L1O43166 1804 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 SNHG28P0DPA3 235 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 SCG2P13521 617 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 SLC1A4P43007 532 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 JAG1P78504 1218 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 CSPP1Q1MSJ5 1256 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 RASGRP2Q7LDG7 609 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 BRAPQ7Z569 592 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 USP48Q86UV5 1035 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 RRP36Q96EU6 259 aaKnown RBP11.58□□□□□ -0.56
USP11-211ENST00000489111 FEZ1Q99689 392 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
USP11-211ENST00000489111 DICER1Q9UPY3 1922 aaKnown RBP11.57□□□□□ -0.56
USP11-211ENST00000489111 hCG_1642624A0A1W2PR95 340 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 UBE2Q2LH0YL09 131 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 CTNND1O60716 968 aaKnown RBP11.57□□□□□ -0.56
USP11-211ENST00000489111 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 KRT85P78386 507 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 PFKFB3Q16875 520 aaPredicted RBP11.57□□□□□ -0.56
USP11-211ENST00000489111 EAPPQ56P03 285 aaPredicted RBP11.57□□□□□ -0.56
USP11-211ENST00000489111 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
USP11-211ENST00000489111 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
USP11-211ENST00000489111 WRNIP1Q96S55 665 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms