RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 USP6NLQ92738 828 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 CRISPLD2Q9H0B8 497 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 HMX1Q9NP08 348 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 HOXC10Q9NYD6 342 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
CCHCR1-215ENST00000488920 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 GPAA1O43292 621 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 APPP05067 770 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 MX1P20591 662 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 RGS2P41220 211 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 CCL14Q16627 93 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 SBK1Q52WX2 424 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 KANSL2Q9H9L4 492 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
CCHCR1-215ENST00000488920 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 PTPREP23469 700 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 LPAR1Q92633 364 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 SH2D4AQ9H788 454 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 MKNK2Q9HBH9 465 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
CCHCR1-215ENST00000488920 SLC15A5A6NIM6 579 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 RAD21O60216 631 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 FLOT1O75955 427 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 GNAT2P19087 354 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 RASA1P20936 1047 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 TDO2P48775 406 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 CACNB2Q08289 660 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 MAP3K21Q5TCX8 1036 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 PAWRQ96IZ0 340 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 APBA2Q99767 749 aa14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 MOV10L1Q9BXT6 1211 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 EPB41L4AQ9HCS5 686 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-215ENST00000488920 CAPN2P17655 700 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 DSG3P32926 999 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 PLS1Q14651 629 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 HABP4Q5JVS0 413 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 DIS3LQ8TF46 1054 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 SPATC1LQ9H0A9 340 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 FLRT1Q9NZU1 646 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 IVNS1ABPQ9Y6Y0 642 aa14.27□□□□□ -0.13
CCHCR1-215ENST00000488920 SALL3Q9BXA9 1300 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 WDR46O15213 610 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 PRDM1O75626 825 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 GRB14Q14449 540 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 ZMYM1Q5SVZ6 1142 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 ZNF444Q8N0Y2 327 aaPredicted RBP14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 NACAP1Q9BZK3 213 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 GOPCQ9HD26 462 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 COLQQ9Y215 455 aaPredicted RBP14.26□□□□□ -0.13
CCHCR1-215ENST00000488920 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 ERCC3P19447 782 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 MFSD14CQ5VZR4 134 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 NECAB2Q7Z6G3 386 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 CLIP2Q9UDT6 1046 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 OGDHLQ9ULD0 1010 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 PLXNB2O15031 1838 aa14.25□□□□□ -0.13
CCHCR1-215ENST00000488920 STRNO43815 780 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 EVI5O60447 810 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 HOXC6P09630 235 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 ADORA2AP29274 412 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 PDE1AP54750 535 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 TMEM132BQ14DG7 1078 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 FAM83BQ5T0W9 1011 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 CCDC129Q6ZRS4 1044 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 DPP9Q86TI2 863 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 NCAPG2Q86XI2 1143 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 ANKLE1Q8NAG6 615 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 SHCBP1Q8NEM2 672 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 NUP88Q99567 741 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 ZNF287Q9HBT7 754 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 NR2E3Q9Y5X4 410 aa14.24□□□□□ -0.13
CCHCR1-215ENST00000488920 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
CCHCR1-215ENST00000488920 F5H6K3 240 aa14.23□□□□□ -0.13
CCHCR1-215ENST00000488920 COBLO75128 1261 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms