RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 NOM1Q5C9Z4 860 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 GADL1Q6ZQY3 521 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 STOX1Q6ZVD7 989 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 GMCL1P1Q8NEA9 526 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ZSCAN10Q96SZ4 725 aaPredicted RBP20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 PNMA3Q9UL41 463 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 STX8Q9UNK0 236 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 LOC285556D6RIA3 1793 aa20.1■□□□□ 0.81
CDK5RAP1-214ENST00000488723 TOP1P11387 765 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MCM5P33992 734 aa20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 SART3Q15020 963 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MB21D2Q8IYB1 491 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 UBAC1Q9BSL1 405 aa20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 TAF6LQ9Y6J9 622 aa20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 MYH4Q9Y623 1939 aa20.09■□□□□ 0.81
CDK5RAP1-214ENST00000488723 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L15C9J2P7 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L13C9JLJ4 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L11C9JVI0 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L18D6R9N7 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L22D6RA61 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L17D6RBQ6 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L19D6RCP7 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L20D6RJB6 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 F5H6K3 240 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 WDR46O15213 610 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 OSBPP22059 807 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 KLRC3Q07444 240 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 USP17L24Q0WX57 530 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 RCSD1Q6JBY9 416 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 CLEC10AQ8IUN9 316 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 RASEFQ8IZ41 740 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 NEK1Q96PY6 1258 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 ZFYVE28Q9HCC9 887 aa20.08■□□□□ 0.81
CDK5RAP1-214ENST00000488723 NMT2O60551 498 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TRPA1O75762 1119 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 VCAM1P19320 739 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 PSMA5P28066 241 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ANAPC15P60006 121 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 CATSPERGQ6ZRH7 1159 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TMTC2Q8N394 836 aa20.07■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ERICH2A1L162 156 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TAF1CQ15572 869 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 CYB5R4Q7L1T6 521 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 GTF3C2Q8WUA4 911 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 GMCL1Q96IK5 515 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TMEM87BQ96K49 555 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TMEM47Q9BQJ4 181 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 SNX14Q9Y5W7 946 aa20.06■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TNKSO95271 1327 aa20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TLR2O60603 784 aa20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 SEC23AQ15436 765 aa20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ZYXQ15942 572 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 DHX32Q7L7V1 743 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ENAHQ8N8S7 591 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 HOXC10Q9NYD6 342 aa20.05■□□□□ 0.8
CDK5RAP1-214ENST00000488723 MYPNQ86TC9 1320 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 IFIT3O14879 490 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 PLA2G6O60733 806 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 NDUFB10O96000 172 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 GCLCP48506 637 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 IRX3P78415 501 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 KIAA1755Q5JYT7 1200 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 LBX2Q6XYB7 198 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 IGDCC4Q8TDY8 1250 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ZKSCAN3Q9BRR0 538 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ASCC2Q9H1I8 757 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 RPAP3Q9H6T3 665 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP1-214ENST00000488723 SEC24BO95487 1268 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 LIFRP42702 1097 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ANTXR2P58335 489 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 EXOSC10Q01780 885 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 CRHR2Q13324 411 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 DGKZQ13574 1117 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 COG2Q14746 738 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 IFIT1BQ5T764 474 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 SLFN13Q68D06 897 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 FBXL16Q8N461 479 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 DCAF4Q8WV16 495 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 KAT14Q9H8E8 782 aa20.03■□□□□ 0.8
CDK5RAP1-214ENST00000488723 PRC1O43663 620 aa20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 WTAPQ15007 396 aa20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 SPICE1Q8N0Z3 855 aa20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 LRRC47Q8N1G4 583 aaKnown RBP20.02■□□□□ 0.8
CDK5RAP1-214ENST00000488723 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.79
CDK5RAP1-214ENST00000488723 SNHG28P0DPA3 235 aa20.01■□□□□ 0.79
CDK5RAP1-214ENST00000488723 FDX1P10109 184 aa20.01■□□□□ 0.79
CDK5RAP1-214ENST00000488723 BMP3P12645 472 aa20.01■□□□□ 0.79
CDK5RAP1-214ENST00000488723 SLC1A4P43007 532 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms