RNA–Protein interactions for RNA: ENST00000488651.5

NR1I3-214, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 3

Gene NR1I3, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-214ENST00000488651 USP6NLQ92738 828 aa15.38■□□□□ 0.05
NR1I3-214ENST00000488651 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.38■□□□□ 0.05
NR1I3-214ENST00000488651 RABGAP1Q9Y3P9 1069 aa15.38■□□□□ 0.05
NR1I3-214ENST00000488651 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
NR1I3-214ENST00000488651 FOXP2O15409 715 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 PRDM1O75626 825 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
NR1I3-214ENST00000488651 SGPL1O95470 568 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 MAPK4P31152 587 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 WDR78Q5VTH9 848 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 PLEKHH3Q7Z736 793 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 GTF3C2Q8WUA4 911 aaPredicted RBP15.37■□□□□ 0.05
NR1I3-214ENST00000488651 ATG4CQ96DT6 458 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 VCPKMTQ9H867 229 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 FRMPD3Q5JV73 1810 aa15.37■□□□□ 0.05
NR1I3-214ENST00000488651 ERC2O15083 957 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 FARP2O94887 1054 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-214ENST00000488651 ZFYP08048 801 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-214ENST00000488651 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
NR1I3-214ENST00000488651 TDO2P48775 406 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 HDAC1Q13547 482 aaPredicted RBP15.36■□□□□ 0.05
NR1I3-214ENST00000488651 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 ARHGEF10LQ9HCE6 1279 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
NR1I3-214ENST00000488651 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 APPP05067 770 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
NR1I3-214ENST00000488651 IFNL3Q8IZI9 196 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 CCDC17Q96LX7 622 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
NR1I3-214ENST00000488651 APBA2Q99767 749 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 MOV10L1Q9BXT6 1211 aaKnown RBP15.35■□□□□ 0.05
NR1I3-214ENST00000488651 LNPKQ9C0E8 428 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
NR1I3-214ENST00000488651 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
NR1I3-214ENST00000488651 H0YGN5 161 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 RAD21O60216 631 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 FLOT1O75955 427 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 SLC34A2O95436 690 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 IGHDP01880 384 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
NR1I3-214ENST00000488651 ZKSCAN1P17029 563 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-214ENST00000488651 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-214ENST00000488651 RGS2P41220 211 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 PDE1AP54750 535 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 CACNB2Q08289 660 aaPredicted RBP15.34■□□□□ 0.05
NR1I3-214ENST00000488651 MAP3K21Q5TCX8 1036 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 VPS53Q5VIR6 699 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 GIMAP6Q6P9H5 292 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 NPLOC4Q8TAT6 608 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 GCC1Q96CN9 775 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 TACC3Q9Y6A5 838 aa15.34■□□□□ 0.05
NR1I3-214ENST00000488651 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.04
NR1I3-214ENST00000488651 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
NR1I3-214ENST00000488651 PTPREP23469 700 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 DSG3P32926 999 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-214ENST00000488651 MAP2K5Q13163 448 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 GRB14Q14449 540 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 COG2Q14746 738 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 LPAR1Q92633 364 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 SPATC1LQ9H0A9 340 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 HMX1Q9NP08 348 aaPredicted RBP15.33■□□□□ 0.04
NR1I3-214ENST00000488651 INCENPQ9NQS7 918 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
NR1I3-214ENST00000488651 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 A0A0D9SFI3 127 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 XRCC5P13010 732 aaKnown RBP15.32■□□□□ 0.04
NR1I3-214ENST00000488651 GNAT2P19087 354 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 ERCC3P19447 782 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 CCNA1P78396 465 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 PLS1Q14651 629 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 TMEM132BQ14DG7 1078 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 DPF3Q92784 378 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 PAWRQ96IZ0 340 aaKnown RBP15.32■□□□□ 0.04
NR1I3-214ENST00000488651 FAM227BQ96M60 508 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 SH2D4AQ9H788 454 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
NR1I3-214ENST00000488651 IRX6P78412 446 aaPredicted RBP15.31■□□□□ 0.04
NR1I3-214ENST00000488651 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
NR1I3-214ENST00000488651 PPARAQ07869 468 aa15.31■□□□□ 0.04
NR1I3-214ENST00000488651 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
NR1I3-214ENST00000488651 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
NR1I3-214ENST00000488651 LRRC47Q8N1G4 583 aaKnown RBP15.31■□□□□ 0.04
NR1I3-214ENST00000488651 NAPBQ9H115 298 aa15.31■□□□□ 0.04
NR1I3-214ENST00000488651 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms