RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SPDYE6P0CI01 402 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 GNL2Q13823 731 aaKnown RBP23.36■■□□□ 1.33
NECAB3-213ENST00000488489 SLC35G1Q2M3R5 365 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 POLR3EQ9NVU0 708 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 CCDC183Q5T5S1 534 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 CLEC10AQ8IUN9 316 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 OXER1Q8TDS5 423 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 TOP1P11387 765 aaKnown RBP23.35■■□□□ 1.33
NECAB3-213ENST00000488489 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 ZSCAN29Q8IWY8 852 aaPredicted RBP23.35■■□□□ 1.33
NECAB3-213ENST00000488489 PIBF1Q8WXW3 757 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 PI4KBQ9UBF8 816 aa23.35■■□□□ 1.33
NECAB3-213ENST00000488489 PALM3A6NDB9 673 aaPredicted RBP23.34■■□□□ 1.33
NECAB3-213ENST00000488489 NR5A1Q13285 461 aa23.34■■□□□ 1.33
NECAB3-213ENST00000488489 GOLGA8HP0CJ92 632 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 SAFBQ15424 915 aaKnown RBP eCLIP23.33■■□□□ 1.33
NECAB3-213ENST00000488489 ANO1Q5XXA6 986 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 LRSAM1Q6UWE0 723 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 ZSCAN30Q86W11 494 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 NLGN2Q8NFZ4 835 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 PHF20Q9BVI0 1012 aa23.33■■□□□ 1.33
NECAB3-213ENST00000488489 CYTH3O43739 400 aa23.33■■□□□ 1.32
NECAB3-213ENST00000488489 EIF6P56537 245 aaKnown RBP23.33■■□□□ 1.32
NECAB3-213ENST00000488489 FOXP1Q9H334 677 aaPredicted RBP23.33■■□□□ 1.32
NECAB3-213ENST00000488489 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 BICD2Q8TD16 824 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 HDAC9Q9UKV0 1011 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 PCDHA7Q9UN72 937 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 CLRN2A0PK11 232 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 ENTPD3O75355 529 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 YEATS4O95619 227 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 SCG2P13521 617 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 ME1P48163 572 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 DLGAP5Q15398 846 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 NPY5RQ15761 445 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 PFKFB3Q16875 520 aaPredicted RBP23.32■■□□□ 1.32
NECAB3-213ENST00000488489 SHROOM1Q2M3G4 852 aaPredicted RBP23.32■■□□□ 1.32
NECAB3-213ENST00000488489 USP17L2Q6R6M4 530 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 JDP2Q8WYK2 163 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 RBSNQ9H1K0 784 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 DACT1Q9NYF0 836 aa23.32■■□□□ 1.32
NECAB3-213ENST00000488489 NR1I2O75469 434 aa23.31■■□□□ 1.32
NECAB3-213ENST00000488489 XBP1P17861 261 aa23.31■■□□□ 1.32
NECAB3-213ENST00000488489 STK38Q15208 465 aa23.31■■□□□ 1.32
NECAB3-213ENST00000488489 SF3A1Q15459 793 aaKnown RBP23.31■■□□□ 1.32
NECAB3-213ENST00000488489 CPVLQ9H3G5 476 aa23.31■■□□□ 1.32
NECAB3-213ENST00000488489 GREB1LQ9C091 1923 aaPredicted RBP23.31■■□□□ 1.32
NECAB3-213ENST00000488489 ATRNL1Q5VV63 1379 aa23.31■■□□□ 1.32
NECAB3-213ENST00000488489 GNAQP50148 359 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 TOB1P50616 345 aaPredicted RBP23.3■■□□□ 1.32
NECAB3-213ENST00000488489 PRELPP51888 382 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 LRRC47Q8N1G4 583 aaKnown RBP23.3■■□□□ 1.32
NECAB3-213ENST00000488489 CLIP2Q9UDT6 1046 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 USP17L5A8MUK1 530 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 TCP10L2B9ZVM9 353 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 KLRF2D3W0D1 207 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 MPHOSPH10O00566 681 aaKnown RBP23.3■■□□□ 1.32
NECAB3-213ENST00000488489 SPTLC2O15270 562 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 HS1BP3Q53T59 392 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 CIAPIN1Q6FI81 312 aa23.3■■□□□ 1.32
NECAB3-213ENST00000488489 ZNF70Q9UC06 446 aaPredicted RBP23.3■■□□□ 1.32
NECAB3-213ENST00000488489 TTLL1O95922 423 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 METTL16Q86W50 562 aaKnown RBP23.29■■□□□ 1.32
NECAB3-213ENST00000488489 FOXP4Q8IVH2 680 aaPredicted RBP23.29■■□□□ 1.32
NECAB3-213ENST00000488489 KCNG4Q8TDN1 519 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 GOLPH3LQ9H4A5 285 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 SHTN1A0MZ66 631 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 PARP1P09874 1014 aaKnown RBP23.29■■□□□ 1.32
NECAB3-213ENST00000488489 RASSF7Q02833 373 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 SLC39A14Q15043 492 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 PTPAQ15257 358 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 CCAR1Q8IX12 1150 aaKnown RBP23.29■■□□□ 1.32
NECAB3-213ENST00000488489 UBE2Q2Q8WVN8 375 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 PDLIM2Q96JY6 352 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 CCDC17Q96LX7 622 aa23.29■■□□□ 1.32
NECAB3-213ENST00000488489 PDHBP11177 359 aa23.28■■□□□ 1.32
NECAB3-213ENST00000488489 CERKLQ49MI3 558 aaPredicted RBP23.28■■□□□ 1.32
NECAB3-213ENST00000488489 EARS2Q5JPH6 523 aaKnown RBP23.28■■□□□ 1.32
NECAB3-213ENST00000488489 SPDYE2Q495Y8 402 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 ADALQ6DHV7 355 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 MTMR14Q8NCE2 650 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 GPKOWQ92917 476 aaPredicted RBP eCLIP23.27■■□□□ 1.324e-6■□□□□ 10.4
NECAB3-213ENST00000488489 CSRNP1Q96S65 589 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 FAM205CA6NFA0 338 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 ADAMTS3O15072 1205 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 KRT2P35908 639 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 CAMK4Q16566 473 aa23.27■■□□□ 1.32
NECAB3-213ENST00000488489 MARCKSP29966 332 aaPredicted RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 AXDND1Q5T1B0 1012 aaPredicted RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 TYW1BQ6NUM6 668 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 SPZ1Q9BXG8 430 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 TMOD2Q9NZR1 351 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 LTBP3Q9NS15 1303 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 COL2A1P02458 1487 aaPredicted RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 LETM1O95202 739 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms