RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NME1P15531 152 aaKnown RBP6.91□□□□□ -1.3
ITGB1-214ENST00000488427 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-214ENST00000488427 SHISA5Q8N114 240 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
ITGB1-214ENST00000488427 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 KIF2CQ99661 725 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 GPATCH2Q9NW75 528 aa6.91□□□□□ -1.3
ITGB1-214ENST00000488427 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 SSBP05455 408 aaKnown RBP eCLIP6.9□□□□□ -1.3
ITGB1-214ENST00000488427 ARID5AQ03989 594 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 ANGEL2Q5VTE6 544 aaKnown RBP6.9□□□□□ -1.3
ITGB1-214ENST00000488427 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
ITGB1-214ENST00000488427 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-214ENST00000488427 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ITGB1-214ENST00000488427 CCDC120Q96HB5 630 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 KREMEN1Q96MU8 473 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 CCDC39Q9UFE4 941 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 CAPN6Q9Y6Q1 641 aa6.9□□□□□ -1.3
ITGB1-214ENST00000488427 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 AOC3Q16853 763 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 TNNI3KQ59H18 835 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 TP53INP2Q8IXH6 220 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 BAHD1Q8TBE0 780 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-214ENST00000488427 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
ITGB1-214ENST00000488427 CECR2Q9BXF3 1484 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-214ENST00000488427 CLEC16AQ2KHT3 1053 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 RIN3Q8TB24 985 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
ITGB1-214ENST00000488427 IKZF1Q13422 519 aa6.87□□□□□ -1.31
ITGB1-214ENST00000488427 NPM2Q86SE8 214 aaKnown RBP6.87□□□□□ -1.31
ITGB1-214ENST00000488427 ENOX1Q8TC92 643 aaKnown RBP6.87□□□□□ -1.31
ITGB1-214ENST00000488427 BCL7CQ8WUZ0 217 aaPredicted RBP6.87□□□□□ -1.31
ITGB1-214ENST00000488427 C8orf37Q96NL8 207 aa6.87□□□□□ -1.31
ITGB1-214ENST00000488427 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
ITGB1-214ENST00000488427 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
ITGB1-214ENST00000488427 LMCD1Q9NZU5 365 aa6.87□□□□□ -1.31
ITGB1-214ENST00000488427 UNC13AQ9UPW8 1703 aa6.87□□□□□ -1.31
ITGB1-214ENST00000488427 DNAJA2O60884 412 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 GIPRP48546 466 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 NKPD1Q17RQ9 610 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 CDKAL1Q5VV42 579 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 LSRQ86X29 649 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-214ENST00000488427 DTWD2Q8NBA8 298 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 ASIC4Q96FT7 647 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
ITGB1-214ENST00000488427 MKRN2Q9H000 416 aaKnown RBP6.86□□□□□ -1.31
ITGB1-214ENST00000488427 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
ITGB1-214ENST00000488427 PITPNM2Q9BZ72 1349 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 UBOX5O94941 541 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 NAT2P11245 290 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 ENDOUP21128 410 aaKnown RBP6.85□□□□□ -1.31
ITGB1-214ENST00000488427 TNK2Q07912 1038 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 PLCL1Q15111 1095 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 SLC6A18Q96N87 628 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 GPR62Q9BZJ7 368 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
ITGB1-214ENST00000488427 PLAGL2Q9UPG8 496 aa6.85□□□□□ -1.31
ITGB1-214ENST00000488427 H3BS24 57 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 PMS1P54277 932 aaKnown RBP6.84□□□□□ -1.31
ITGB1-214ENST00000488427 JAG1P78504 1218 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 RBM10P98175 930 aaKnown RBP6.84□□□□□ -1.31
ITGB1-214ENST00000488427 NBPF12Q5TAG4 269 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-214ENST00000488427 CBLL1Q75N03 491 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 HSPA12BQ96MM6 686 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 SLC9A7Q96T83 725 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 ANTXR1Q9H6X2 564 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 PCDHB12Q9Y5F1 795 aa6.84□□□□□ -1.31
ITGB1-214ENST00000488427 CC2D2AQ9P2K1 1620 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 PRR33A8MZF0 331 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
ITGB1-214ENST00000488427 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 UBE2FQ969M7 185 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 ZSWIM5Q9P217 1185 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 ST14Q9Y5Y6 855 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 CUX2O14529 1486 aa6.83□□□□□ -1.32
ITGB1-214ENST00000488427 SSU72P8A0A1W2PR75 194 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 BIN1O00499 593 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 JUNBP17275 347 aaPredicted RBP6.82□□□□□ -1.32
ITGB1-214ENST00000488427 FUT4P22083 530 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 LTKP29376 864 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 POLR2BP30876 1174 aaKnown RBP6.82□□□□□ -1.32
ITGB1-214ENST00000488427 CASP7P55210 303 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
ITGB1-214ENST00000488427 TCEAL1Q15170 157 aa6.82□□□□□ -1.32
ITGB1-214ENST00000488427 SF3A1Q15459 793 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms