RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 ARID5AQ03989 594 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 TAB3Q8N5C8 712 aaPredicted RBP6.53□□□□□ -1.36
TTC3-220ENST00000487711 DTWD2Q8NBA8 298 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 OR6P1Q8NGX9 317 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
TTC3-220ENST00000487711 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 Q96M66 194 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
TTC3-220ENST00000487711 SSBP05455 408 aaKnown RBP eCLIP6.52□□□□□ -1.37
TTC3-220ENST00000487711 DNAJA1P31689 397 aaKnown RBP6.52□□□□□ -1.37
TTC3-220ENST00000487711 CD96P40200 585 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 ZNF574Q6ZN55 896 aaPredicted RBP6.52□□□□□ -1.37
TTC3-220ENST00000487711 SPRED2Q7Z698 418 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 TP53INP2Q8IXH6 220 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 TMEM192Q8IY95 271 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 SHDQ96IW2 340 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 ZNF512BQ96KM6 892 aaPredicted RBP6.52□□□□□ -1.37
TTC3-220ENST00000487711 DHRS1Q96LJ7 313 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 FBXL18Q96ME1 805 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
TTC3-220ENST00000487711 ST14Q9Y5Y6 855 aa6.52□□□□□ -1.37
TTC3-220ENST00000487711 COL17A1Q9UMD9 1497 aaPredicted RBP6.52□□□□□ -1.37
TTC3-220ENST00000487711 PITPNM2Q9BZ72 1349 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
TTC3-220ENST00000487711 IKZF1Q13422 519 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 NBPF12Q5TAG4 269 aaPredicted RBP6.51□□□□□ -1.37
TTC3-220ENST00000487711 UNC5AQ6ZN44 842 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 UBE2FQ969M7 185 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 MKRN2Q9H000 416 aaKnown RBP6.51□□□□□ -1.37
TTC3-220ENST00000487711 ZSWIM5Q9P217 1185 aa6.51□□□□□ -1.37
TTC3-220ENST00000487711 CD8BP10966 210 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 NAALADL2Q58DX5 795 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 ANGEL2Q5VTE6 544 aaKnown RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 THAP5Q7Z6K1 395 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 TTC6Q86TZ1 520 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 SLC43A3Q8NBI5 491 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 VWCEQ96DN2 955 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 ASCC2Q9H1I8 757 aaPredicted RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 TRIT1Q9H3H1 467 aaKnown RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 ATP13A1Q9HD20 1204 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 SEMA3GQ9NS98 782 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 GPATCH2Q9NW75 528 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 SUCOQ9UBS9 1254 aaKnown RBP6.5□□□□□ -1.37
TTC3-220ENST00000487711 MRVI1Q9Y6F6 885 aa6.5□□□□□ -1.37
TTC3-220ENST00000487711 CLEC16AQ2KHT3 1053 aa6.49□□□□□ -1.37
TTC3-220ENST00000487711 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
TTC3-220ENST00000487711 C19orf47Q8N9M1 422 aaKnown RBP6.49□□□□□ -1.37
TTC3-220ENST00000487711 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
TTC3-220ENST00000487711 SLC12A7Q9Y666 1083 aa6.49□□□□□ -1.37
TTC3-220ENST00000487711 A0A1W2PQH9 124 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 FGRP09769 529 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 TPP2P29144 1249 aaPredicted RBP6.48□□□□□ -1.37
TTC3-220ENST00000487711 PMS1P54277 932 aaKnown RBP6.48□□□□□ -1.37
TTC3-220ENST00000487711 PLCL1Q15111 1095 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 TDRD10Q5VZ19 366 aaKnown RBP6.48□□□□□ -1.37
TTC3-220ENST00000487711 MCF2L2Q86YR7 1114 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 FAM169BQ8N8A8 192 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 DUSP15Q9H1R2 295 aaPredicted RBP6.48□□□□□ -1.37
TTC3-220ENST00000487711 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
TTC3-220ENST00000487711 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 TP53P04637 393 aaPredicted RBP6.47□□□□□ -1.37
TTC3-220ENST00000487711 ZP2Q05996 745 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 NMIQ13287 307 aaPredicted RBP6.47□□□□□ -1.37
TTC3-220ENST00000487711 BBS9Q3SYG4 887 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 ABI1Q8IZP0 508 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 FBXL21Q9UKT6 434 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 OAS3Q9Y6K5 1087 aaKnown RBP6.47□□□□□ -1.37
TTC3-220ENST00000487711 LTBP3Q9NS15 1303 aa6.47□□□□□ -1.37
TTC3-220ENST00000487711 SHISA3A0PJX4 238 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 C9IYK1 514 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 SRFP11831 508 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 FUT4P22083 530 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 CASP7P55210 303 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 SNW1Q13573 536 aaKnown RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 AUHQ13825 339 aaKnown RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 TMPRSS7Q7RTY8 843 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 TMC3Q7Z5M5 1100 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 TSPYL5Q86VY4 417 aaPredicted RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 PPFIBP1Q86W92 1011 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 CREG2Q8IUH2 290 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 PI4K2BQ8TCG2 481 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 C8orf37Q96NL8 207 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 GMLQ99445 158 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 PRDM14Q9GZV8 571 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 PHAXQ9H814 394 aaKnown RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 CARS2Q9HA77 564 aaKnown RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 DUSP13Q9UII6 198 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 ZNF214Q9UL59 606 aaPredicted RBP6.46□□□□□ -1.38
TTC3-220ENST00000487711 PCDHB10Q9UN67 800 aa6.46□□□□□ -1.38
TTC3-220ENST00000487711 PCDHB12Q9Y5F1 795 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms