RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 GSTTP1A0A1W2PQM5 241 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLC5A1P13866 664 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CROCCP2Q86T23 111 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 DONSONQ9NYP3 566 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLC24A3Q9HC58 644 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CALM1P0DP23 149 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CALM2P0DP24 149 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CALM3P0DP25 149 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 HPCAL4Q9UM19 191 aa17■□□□□ 0.31
HLA-DQB1-209ENST00000487676 ACTN3Q08043 901 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 NBPF9Q3BBW0 867 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 ABHD10Q9NUJ1 306 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 MTRF1LQ9UGC7 380 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 ANO9A1A5B4 782 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RASGRP2Q7LDG7 609 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLC4A4Q9Y6R1 1079 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 HMGB1P1B2RPK0 211 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 KCNQ3O43525 872 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 LUC7L3O95232 432 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GBP1P32455 592 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
HLA-DQB1-209ENST00000487676 MAP2K7O14733 419 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 TEX33O43247 280 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GTPBP6O43824 516 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SETDB1Q15047 1291 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CSRNP2Q9H175 543 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SATB1Q01826 763 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CCDC170Q8IYT3 715 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 ZKSCAN3Q9BRR0 538 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 STIM2Q9P246 746 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 HEXIM1O94992 359 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PDE4DQ08499 809 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CCDC197Q8NCU1 140 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 EPB41L5Q9HCM4 733 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SRGAP2O75044 1071 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 UTP11Q9Y3A2 253 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-209ENST00000487676 MAST3O60307 1309 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GLI2P10070 1586 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 CEP104O60308 925 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 TCP11Q8WWU5 503 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 FOXP1Q9H334 677 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RAB21Q9UL25 225 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GNAT2P19087 354 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 USP5P45974 858 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PPP2R5BQ15173 497 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RPS6KA1Q15418 735 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 APOA5Q6Q788 366 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RNF14Q9UBS8 474 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 EFCAB6Q5THR3 1501 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 MPHOSPH10O00566 681 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 KRT31Q15323 416 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 WDR93Q6P2C0 686 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SHC4Q6S5L8 630 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 NOA1Q8NC60 698 aaKnown RBP16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RPS6KA5O75582 802 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLMAPQ14BN4 828 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 RAD9BQ6WBX8 426 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 FAM212AQ96EL1 285 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PLCB1Q9NQ66 1216 aa16.97■□□□□ 0.31
HLA-DQB1-209ENST00000487676 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 EEF1GP26641 437 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 DRP2Q13474 957 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SYMPKQ92797 1274 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 AIFM3Q96NN9 605 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PLIN2Q99541 437 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PAIP2Q9BPZ3 127 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 VCXQ9H320 206 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 GPHNQ9NQX3 736 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 A0A1B0GTH6 734 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 HIP1RO75146 1068 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PRPHP41219 470 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SLC7A5Q01650 507 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 FOXR1Q6PIV2 292 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 XAGE2Q96GT9 111 aa16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-209ENST00000487676 PTPREP23469 700 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 PARP9Q8IXQ6 854 aa16.95■□□□□ 0.3
HLA-DQB1-209ENST00000487676 WHAMMQ8TF30 809 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms