RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 E7EWF7 191 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 REC8O95072 547 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 OSBPP22059 807 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 IRX3P78415 501 aaPredicted RBP23.09■■□□□ 1.29
SEC22A-208ENST00000487572 TRDNQ13061 729 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 STOX1Q6ZVD7 989 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
SEC22A-208ENST00000487572 PNMA3Q9UL41 463 aa23.09■■□□□ 1.29
SEC22A-208ENST00000487572 NECTIN1Q15223 517 aa23.08■■□□□ 1.29
SEC22A-208ENST00000487572 PPP4R3BQ5MIZ7 849 aa23.08■■□□□ 1.29
SEC22A-208ENST00000487572 RALYLQ86SE5 291 aaKnown RBP23.08■■□□□ 1.29
SEC22A-208ENST00000487572 SMCR8Q8TEV9 937 aaPredicted RBP23.08■■□□□ 1.29
SEC22A-208ENST00000487572 ASCC2Q9H1I8 757 aaPredicted RBP23.08■■□□□ 1.29
SEC22A-208ENST00000487572 CPA4Q9UI42 421 aa23.08■■□□□ 1.29
SEC22A-208ENST00000487572 GPR25O00155 361 aa23.07■■□□□ 1.28
SEC22A-208ENST00000487572 LPAR1Q92633 364 aa23.07■■□□□ 1.28
SEC22A-208ENST00000487572 CHMP4CQ96CF2 233 aa23.07■■□□□ 1.28
SEC22A-208ENST00000487572 TANGO6Q9C0B7 1094 aa23.07■■□□□ 1.28
SEC22A-208ENST00000487572 TCP11L1Q9NUJ3 509 aa23.07■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L15C9J2P7 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L13C9JLJ4 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L11C9JVI0 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L18D6R9N7 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L22D6RA61 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L17D6RBQ6 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L19D6RCP7 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L20D6RJB6 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 TLR2O60603 784 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 HOXA7P31268 230 aaPredicted RBP23.06■■□□□ 1.28
SEC22A-208ENST00000487572 USP17L24Q0WX57 530 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 RNF20Q5VTR2 975 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 IQCA1Q86XH1 822 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 NCOA7Q8NI08 942 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 MKL1Q969V6 931 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 ZSWIM5Q9P217 1185 aa23.06■■□□□ 1.28
SEC22A-208ENST00000487572 F5H6K3 240 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 NDUFB10O96000 172 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 NT5C2P49902 561 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 KLRC3Q07444 240 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 CYB5R4Q7L1T6 521 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 ZNF296Q8WUU4 475 aaPredicted RBP23.05■■□□□ 1.28
SEC22A-208ENST00000487572 NUP88Q99567 741 aaPredicted RBP23.05■■□□□ 1.28
SEC22A-208ENST00000487572 P2RX7Q99572 595 aaKnown RBP23.05■■□□□ 1.28
SEC22A-208ENST00000487572 UBAC1Q9BSL1 405 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 MTMR7Q9Y216 660 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 ADGRA2Q96PE1 1338 aa23.05■■□□□ 1.28
SEC22A-208ENST00000487572 WDR46O15213 610 aaKnown RBP23.04■■□□□ 1.28
SEC22A-208ENST00000487572 FAM83BQ5T0W9 1011 aa23.04■■□□□ 1.28
SEC22A-208ENST00000487572 SAMD1Q6SPF0 538 aaPredicted RBP23.04■■□□□ 1.28
SEC22A-208ENST00000487572 CATSPERGQ6ZRH7 1159 aa23.04■■□□□ 1.28
SEC22A-208ENST00000487572 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
SEC22A-208ENST00000487572 ISY1Q9ULR0 285 aaKnown RBP23.04■■□□□ 1.28
SEC22A-208ENST00000487572 MYH4Q9Y623 1939 aa23.04■■□□□ 1.28
SEC22A-208ENST00000487572 FKTNO75072 461 aa23.03■■□□□ 1.28
SEC22A-208ENST00000487572 TOP1P11387 765 aaKnown RBP23.03■■□□□ 1.28
SEC22A-208ENST00000487572 SLFN13Q68D06 897 aa23.03■■□□□ 1.28
SEC22A-208ENST00000487572 GMCL1P1Q8NEA9 526 aa23.03■■□□□ 1.28
SEC22A-208ENST00000487572 TMEM47Q9BQJ4 181 aa23.03■■□□□ 1.28
SEC22A-208ENST00000487572 SYNPO2Q9UMS6 1093 aa23.03■■□□□ 1.28
SEC22A-208ENST00000487572 ECM2O94769 699 aaPredicted RBP23.02■■□□□ 1.28
SEC22A-208ENST00000487572 ZKSCAN1P17029 563 aaPredicted RBP23.02■■□□□ 1.28
SEC22A-208ENST00000487572 NOVP48745 357 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 HERVK_113P62684 666 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 CCDC178Q5BJE1 867 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 RCSD1Q6JBY9 416 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 C17orf99Q6UX52 265 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 CHST3Q7LGC8 479 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 RASEFQ8IZ41 740 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 TNKSO95271 1327 aa23.02■■□□□ 1.28
SEC22A-208ENST00000487572 FLOT1O75955 427 aa23.01■■□□□ 1.27
SEC22A-208ENST00000487572 SP3Q02447 781 aa23.01■■□□□ 1.27
SEC22A-208ENST00000487572 NOM1Q5C9Z4 860 aaKnown RBP23.01■■□□□ 1.27
SEC22A-208ENST00000487572 MB21D2Q8IYB1 491 aaPredicted RBP23.01■■□□□ 1.27
SEC22A-208ENST00000487572 ANKRD13CQ8N6S4 541 aa23.01■■□□□ 1.27
SEC22A-208ENST00000487572 ENAHQ8N8S7 591 aaPredicted RBP23.01■■□□□ 1.27
SEC22A-208ENST00000487572 TTC14Q96N46 770 aa23.01■■□□□ 1.27
SEC22A-208ENST00000487572 HSPA4P34932 840 aa23■■□□□ 1.27
SEC22A-208ENST00000487572 GCLCP48506 637 aaPredicted RBP23■■□□□ 1.27
SEC22A-208ENST00000487572 RASGRP2Q7LDG7 609 aa23■■□□□ 1.27
SEC22A-208ENST00000487572 DGKHQ86XP1 1220 aa23■■□□□ 1.27
SEC22A-208ENST00000487572 PAGR1Q9BTK6 254 aa23■■□□□ 1.27
SEC22A-208ENST00000487572 PRDM10Q9NQV6 1147 aa23■■□□□ 1.27
SEC22A-208ENST00000487572 IFIT3O14879 490 aaKnown RBP22.99■■□□□ 1.27
SEC22A-208ENST00000487572 PEX10O60683 326 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 BCRP11274 1271 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 MCCP23508 829 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 COG2Q14746 738 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 CD99L2Q8TCZ2 262 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 USP26Q9BXU7 913 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 KAT14Q9H8E8 782 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 FBXO28Q9NVF7 368 aa22.99■■□□□ 1.27
SEC22A-208ENST00000487572 ERICH2A1L162 156 aa22.98■■□□□ 1.27
SEC22A-208ENST00000487572 SPDYE16A6NNV3 312 aaPredicted RBP22.98■■□□□ 1.27
SEC22A-208ENST00000487572 BMP3P12645 472 aa22.98■■□□□ 1.27
SEC22A-208ENST00000487572 SLC1A4P43007 532 aa22.98■■□□□ 1.27
SEC22A-208ENST00000487572 ANTXR2P58335 489 aa22.98■■□□□ 1.27
SEC22A-208ENST00000487572 COL9A3Q14050 684 aaPredicted RBP22.98■■□□□ 1.27
SEC22A-208ENST00000487572 CCDC96Q2M329 555 aa22.98■■□□□ 1.27
SEC22A-208ENST00000487572 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
SEC22A-208ENST00000487572 PRC1O43663 620 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms