RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 LRRFIP1Q32MZ4 808 aaKnown RBP28.3■■■□□ 2.12
PLOD3-215ENST00000487563 MORN1Q5T089 497 aa28.3■■■□□ 2.12
PLOD3-215ENST00000487563 LPAR1Q92633 364 aa28.3■■■□□ 2.12
PLOD3-215ENST00000487563 STRBPQ96SI9 672 aaKnown RBP28.3■■■□□ 2.12
PLOD3-215ENST00000487563 BTBD7Q9P203 1132 aa28.3■■■□□ 2.12
PLOD3-215ENST00000487563 TTC41PQ6P2S7 1318 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 ERC2O15083 957 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 RNF113AO15541 343 aaKnown RBP28.29■■■□□ 2.12
PLOD3-215ENST00000487563 ATP2B2Q01814 1243 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 COG2Q14746 738 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 USP6NLQ92738 828 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 HOXC10Q9NYD6 342 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 ZBTB47Q9UFB7 747 aaPredicted RBP28.29■■■□□ 2.12
PLOD3-215ENST00000487563 NR2E3Q9Y5X4 410 aa28.29■■■□□ 2.12
PLOD3-215ENST00000487563 MAP2K5Q13163 448 aa28.28■■■□□ 2.12
PLOD3-215ENST00000487563 TMX2Q9Y320 296 aa28.28■■■□□ 2.12
PLOD3-215ENST00000487563 MAP3K21Q5TCX8 1036 aa28.27■■■□□ 2.12
PLOD3-215ENST00000487563 SPICE1Q8N0Z3 855 aa28.27■■■□□ 2.12
PLOD3-215ENST00000487563 ANKLE1Q8NAG6 615 aa28.27■■■□□ 2.12
PLOD3-215ENST00000487563 OSBP2Q969R2 916 aa28.27■■■□□ 2.12
PLOD3-215ENST00000487563 PAWRQ96IZ0 340 aaKnown RBP28.27■■■□□ 2.12
PLOD3-215ENST00000487563 VCPKMTQ9H867 229 aa28.27■■■□□ 2.12
PLOD3-215ENST00000487563 SLC15A5A6NIM6 579 aa28.26■■■□□ 2.11
PLOD3-215ENST00000487563 PTPREP23469 700 aa28.26■■■□□ 2.11
PLOD3-215ENST00000487563 CCL14Q16627 93 aa28.26■■■□□ 2.11
PLOD3-215ENST00000487563 SAMD1Q6SPF0 538 aaPredicted RBP28.26■■■□□ 2.11
PLOD3-215ENST00000487563 NECAB2Q7Z6G3 386 aa28.26■■■□□ 2.11
PLOD3-215ENST00000487563 YTHDC1Q96MU7 727 aaKnown RBP28.26■■■□□ 2.11
PLOD3-215ENST00000487563 KANSL2Q9H9L4 492 aa28.26■■■□□ 2.11
PLOD3-215ENST00000487563 COLQQ9Y215 455 aaPredicted RBP28.26■■■□□ 2.11
PLOD3-215ENST00000487563 CEP290O15078 2479 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 GSG1L2A8MUP6 293 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 MINDY4BA8MYZ0 360 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 GPAA1O43292 621 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 FLOT1O75955 427 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 KIAA1755Q5JYT7 1200 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 GIMAP6Q6P9H5 292 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 SIAH1Q8IUQ4 282 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 CRBNQ96SW2 442 aa28.25■■■□□ 2.11
PLOD3-215ENST00000487563 WDR46O15213 610 aaKnown RBP28.24■■■□□ 2.11
PLOD3-215ENST00000487563 EVI5O60447 810 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 APPP05067 770 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 EEF2P13639 858 aaKnown RBP28.24■■■□□ 2.11
PLOD3-215ENST00000487563 GNAT2P19087 354 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 TDO2P48775 406 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 CACNB2Q08289 660 aaPredicted RBP28.24■■■□□ 2.11
PLOD3-215ENST00000487563 SBK1Q52WX2 424 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 STK11IPQ8N1F8 1099 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 MB21D1Q8N884 522 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 DIS3LQ8TF46 1054 aaKnown RBP28.24■■■□□ 2.11
PLOD3-215ENST00000487563 FSD1Q9BTV5 496 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 MKNK2Q9HBH9 465 aa28.24■■■□□ 2.11
PLOD3-215ENST00000487563 RAD21O60216 631 aa28.23■■■□□ 2.11
PLOD3-215ENST00000487563 PLS1Q14651 629 aa28.23■■■□□ 2.11
PLOD3-215ENST00000487563 MFSD14CQ5VZR4 134 aa28.23■■■□□ 2.11
PLOD3-215ENST00000487563 OTUD7AQ8TE49 926 aaPredicted RBP28.23■■■□□ 2.11
PLOD3-215ENST00000487563 GOPCQ9HD26 462 aa28.23■■■□□ 2.11
PLOD3-215ENST00000487563 A0A0G2JMZ2 1700 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 M0R2C6 588 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 MX1P20591 662 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 DSG3P32926 999 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 GRB14Q14449 540 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 CHRDL2Q6WN34 429 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 PI4K2BQ8TCG2 481 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 MOV10L1Q9BXT6 1211 aaKnown RBP28.22■■■□□ 2.11
PLOD3-215ENST00000487563 SPATC1LQ9H0A9 340 aa28.22■■■□□ 2.11
PLOD3-215ENST00000487563 ATG4CQ96DT6 458 aa28.21■■■□□ 2.11
PLOD3-215ENST00000487563 NBPF3Q9H094 633 aa28.21■■■□□ 2.11
PLOD3-215ENST00000487563 OGDHLQ9ULD0 1010 aa28.21■■■□□ 2.11
PLOD3-215ENST00000487563 ROBO3Q96MS0 1386 aa28.21■■■□□ 2.11
PLOD3-215ENST00000487563 CCND3P30281 292 aaPredicted RBP28.2■■■□□ 2.1
PLOD3-215ENST00000487563 SHCBP1Q8NEM2 672 aa28.2■■■□□ 2.1
PLOD3-215ENST00000487563 EPB41L4AQ9HCS5 686 aaPredicted RBP28.2■■■□□ 2.1
PLOD3-215ENST00000487563 RASA1P20936 1047 aa28.19■■■□□ 2.1
PLOD3-215ENST00000487563 ANKRD45Q5TZF3 282 aa28.19■■■□□ 2.1
PLOD3-215ENST00000487563 DPP9Q86TI2 863 aa28.19■■■□□ 2.1
PLOD3-215ENST00000487563 NACAP1Q9BZK3 213 aa28.19■■■□□ 2.1
PLOD3-215ENST00000487563 ZNF287Q9HBT7 754 aa28.19■■■□□ 2.1
PLOD3-215ENST00000487563 RLFQ13129 1914 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 HOXC6P09630 235 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 ERCC3P19447 782 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 NCAPG2Q86XI2 1143 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 C11orf49Q9H6J7 331 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 FLRT1Q9NZU1 646 aa28.18■■■□□ 2.1
PLOD3-215ENST00000487563 STRNO43815 780 aa28.17■■■□□ 2.1
PLOD3-215ENST00000487563 ADORA2AP29274 412 aa28.17■■■□□ 2.1
PLOD3-215ENST00000487563 NPLOC4Q8TAT6 608 aa28.17■■■□□ 2.1
PLOD3-215ENST00000487563 MROH8Q9H579 483 aa28.17■■■□□ 2.1
PLOD3-215ENST00000487563 PATL2C9JE40 543 aaKnown RBP28.16■■■□□ 2.1
PLOD3-215ENST00000487563 SEC62Q99442 399 aaKnown RBP28.16■■■□□ 2.1
PLOD3-215ENST00000487563 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.16■■■□□ 2.1
PLOD3-215ENST00000487563 ZNF236Q9UL36 1845 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 CNGA1P29973 690 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 FAM83BQ5T0W9 1011 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 IFNL3Q8IZI9 196 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 ZNF444Q8N0Y2 327 aaPredicted RBP28.15■■■□□ 2.1
PLOD3-215ENST00000487563 FBXO28Q9NVF7 368 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 SLC5A4Q9NY91 659 aa28.15■■■□□ 2.1
PLOD3-215ENST00000487563 GREB1LQ9C091 1923 aaPredicted RBP28.15■■■□□ 2.1
PLOD3-215ENST00000487563 CYP2C19P33261 490 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms