RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 PRAMEF19Q5SWL8 479 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 SH3RF1Q7Z6J0 888 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 ARRDC4Q8NCT1 418 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 SERPINB13Q9UIV8 391 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 FPGT-TNNI3KV9GXZ4 949 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 REV3LO60673 3130 aa10.25□□□□□ -0.77
HOXA9-204ENST00000487384 PARP14Q460N5 1801 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 ZNF236Q9UL36 1845 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 TRIM43BA6NCK2 446 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 FOSL2P15408 326 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 TATDN1Q6P1N9 297 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 CLUAP1Q96AJ1 413 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 TRIM43Q96BQ3 446 aaPredicted RBP10.24□□□□□ -0.77
HOXA9-204ENST00000487384 MOV10L1Q9BXT6 1211 aaKnown RBP10.24□□□□□ -0.77
HOXA9-204ENST00000487384 KIAA1683Q9H0B3 1180 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 CABP5Q9NP86 173 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 PRDM6Q9NQX0 595 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 PDLIM7Q9NR12 457 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
HOXA9-204ENST00000487384 BAZ2AQ9UIF9 1905 aaKnown RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 COBLO75128 1261 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 CT47B1P0C2W7 299 aaPredicted RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 ERCC3P19447 782 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 SHMT1P34896 483 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 PLCD1P51178 756 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 PLS1Q14651 629 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 SEPT2Q15019 361 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 FAM47AQ5JRC9 791 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 LBX2Q6XYB7 198 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 MAGEB6Q8N7X4 407 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 FRAT1Q92837 279 aaPredicted RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 TANGO6Q9C0B7 1094 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
HOXA9-204ENST00000487384 A0A0G2JMZ2 1700 aa10.23□□□□□ -0.77
HOXA9-204ENST00000487384 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 A0A1W2PRG0 241 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 MPHOSPH10O00566 681 aaKnown RBP10.22□□□□□ -0.77
HOXA9-204ENST00000487384 SEPT4O43236 478 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 BCAR3O75815 825 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 IGHA2P01877 340 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 TRIM27P14373 513 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 ITGB8P26012 769 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 EPHB4P54760 987 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 SMAD3P84022 425 aaKnown RBP10.22□□□□□ -0.77
HOXA9-204ENST00000487384 CACNB1Q02641 598 aaPredicted RBP10.22□□□□□ -0.77
HOXA9-204ENST00000487384 EVX2Q03828 476 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 TLE2Q04725 743 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 SNX17Q15036 470 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 LRRC41Q15345 812 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 TTC6Q86TZ1 520 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 ARHGAP45Q92619 1136 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 RNPC3Q96LT9 517 aaKnown RBP10.22□□□□□ -0.77
HOXA9-204ENST00000487384 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 EHD4Q9H223 541 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 ANTXR1Q9H6X2 564 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 C1orf115Q9H7X2 142 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 GPR108Q9NPR9 543 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 DBNLQ9UJU6 430 aaKnown RBP10.22□□□□□ -0.77
HOXA9-204ENST00000487384 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
HOXA9-204ENST00000487384 MCM3APO60318 1980 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 STRNO43815 780 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.77
HOXA9-204ENST00000487384 POLR3DP05423 398 aaPredicted RBP10.21□□□□□ -0.77
HOXA9-204ENST00000487384 COG2Q14746 738 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 KIAA1755Q5JYT7 1200 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 USP38Q8NB14 1042 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.77
HOXA9-204ENST00000487384 PQBP1O60828 265 aaKnown RBP10.2□□□□□ -0.78
HOXA9-204ENST00000487384 PGK1P00558 417 aa10.2□□□□□ -0.78
HOXA9-204ENST00000487384 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
HOXA9-204ENST00000487384 CLEC10AQ8IUN9 316 aa10.2□□□□□ -0.78
HOXA9-204ENST00000487384 SPICE1Q8N0Z3 855 aa10.2□□□□□ -0.78
HOXA9-204ENST00000487384 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
HOXA9-204ENST00000487384 MAML3Q96JK9 1138 aa10.2□□□□□ -0.78
HOXA9-204ENST00000487384 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
HOXA9-204ENST00000487384 TCF20Q9UGU0 1960 aaKnown RBP10.2□□□□□ -0.78
HOXA9-204ENST00000487384 GBF1Q92538 1859 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 IPO8O15397 1037 aaKnown RBP10.19□□□□□ -0.78
HOXA9-204ENST00000487384 FLOT1O75955 427 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 PGK2P07205 417 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 CLTBP09497 229 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 RAG1P15918 1043 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 TAL1P17542 331 aaPredicted RBP10.19□□□□□ -0.78
HOXA9-204ENST00000487384 MAP3K12Q12852 859 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 TMEM57Q8N5G2 664 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 SLC44A5Q8NCS7 719 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 SHCBP1Q8NEM2 672 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 SSH3Q8TE77 659 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 LENG1Q96BZ8 264 aaPredicted RBP10.19□□□□□ -0.78
HOXA9-204ENST00000487384 EAF2Q96CJ1 260 aaPredicted RBP10.19□□□□□ -0.78
HOXA9-204ENST00000487384 ATG4CQ96DT6 458 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 XPNPEP3Q9NQH7 507 aa10.19□□□□□ -0.78
HOXA9-204ENST00000487384 MCM9Q9NXL9 1143 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms