RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 IL13P35225 146 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 PRELPP51888 382 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 NFIXQ14938 502 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 AKAP4Q5JQC9 854 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 IL22RA1Q8N6P7 574 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 SLC52A2Q9HAB3 445 aa6.93□□□□□ -1.3
R3HDM1-218ENST00000487294 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 DEAF1O75398 565 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 CES1P23141 567 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 HTRA3P83110 453 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 EHHADHQ08426 723 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 USPL1Q5W0Q7 1092 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 CEP135Q66GS9 1140 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 SULT6B1Q6IMI4 303 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 KRTAP1-3Q8IUG1 177 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 DNAJC10Q8IXB1 793 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 TTLL6Q8N841 843 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 CCER1Q8TC90 406 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 PANK3Q9H999 370 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 FOXD3Q9UJU5 478 aaPredicted RBP6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 COL15A1P39059 1388 aa6.92□□□□□ -1.3
R3HDM1-218ENST00000487294 UBR2Q8IWV8 1755 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 NFKBIEO00221 500 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 EREGO14944 169 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 BRD1O95696 1058 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 ACPPP15309 386 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 TNNT2P45379 298 aaPredicted RBP6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 EIF5P55010 431 aaKnown RBP6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 PBX4Q9BYU1 374 aa6.91□□□□□ -1.3
R3HDM1-218ENST00000487294 H0YIN7 160 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 TRPA1O75762 1119 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 SMNDC1O75940 238 aaKnown RBP eCLIP6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 SERPINB2P05120 415 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 BRIP1Q9BX63 1249 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 LGR6Q9HBX8 967 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 ZBTB1Q9Y2K1 713 aa6.9□□□□□ -1.3
R3HDM1-218ENST00000487294 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.31
R3HDM1-218ENST00000487294 DICER1Q9UPY3 1922 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 A0A087WZG4 1122 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 RNMTO43148 476 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 HYAL3O43820 417 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 PHACTR2O75167 634 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 HSPA1AP0DMV8 641 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 HSPA1BP0DMV9 641 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 MORC1Q86VD1 984 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 C2CD5Q86YS7 1000 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 CACTIN-AS1Q8N1I8 211 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 TEX13AQ9BXU3 409 aaPredicted RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 GNEQ9Y223 722 aaKnown RBP6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 TIAM2Q8IVF5 1701 aa6.89□□□□□ -1.31
R3HDM1-218ENST00000487294 CCDC88AQ3V6T2 1871 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 ANKRD31Q8N7Z5 1873 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 CARMIL3Q8ND23 1372 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 SOWAHDA6NJG2 315 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 DLL1O00548 723 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 STARD3NLO95772 234 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 PDE6BP35913 854 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 IL6STP40189 918 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 TRIM26Q12899 539 aaPredicted RBP6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 SLC39A6Q13433 755 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 ZFYVE28Q9HCC9 887 aa6.88□□□□□ -1.31
R3HDM1-218ENST00000487294 VIRMAQ69YN4 1812 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 SCN7AQ01118 1682 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 PASKQ96RG2 1323 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 LINC01387J3KSC0 135 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 CDC27P30260 824 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 MTHFSDQ2M296 383 aaKnown RBP6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 SOGA3Q5TF21 947 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 KNSTRNQ9Y448 316 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
R3HDM1-218ENST00000487294 CEMIPQ8WUJ3 1361 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 NPC1L1Q9UHC9 1359 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 HEG1Q9ULI3 1381 aa6.86□□□□□ -1.31
R3HDM1-218ENST00000487294 KLRG2A4D1S0 409 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms