RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 USP17L15C9J2P7 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L13C9JLJ4 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L11C9JVI0 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L18D6R9N7 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L22D6RA61 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L17D6RBQ6 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L19D6RCP7 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L20D6RJB6 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 ADAMTS4O75173 837 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 PGK1P00558 417 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 RARBP10826 455 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L24Q0WX57 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 WDR43Q15061 677 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 SHROOM1Q2M3G4 852 aaPredicted RBP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 USP17L2Q6R6M4 530 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 CATSPERGQ6ZRH7 1159 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 FAM178BQ8IXR5 827 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 GJD3Q8N144 294 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 KLHDC4Q8TBB5 520 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 ZNF384Q8TF68 577 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 BICC1Q9H694 974 aaKnown RBP14.58□□□□□ -0.08
TRIM56-204ENST00000487252 DNAJC18Q9H819 358 aa14.58□□□□□ -0.08
TRIM56-204ENST00000487252 POTEB3A0JP26 581 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 RFXAPO00287 272 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 MYOGP15173 224 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 ACLYP53396 1101 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 RABGGTBP53611 331 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 KRT40Q6A162 431 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 CCSAPQ6IQ19 270 aaPredicted RBP14.57□□□□□ -0.08
TRIM56-204ENST00000487252 POTEBQ6S5H4 581 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
TRIM56-204ENST00000487252 MTIF3Q9H2K0 278 aaKnown RBP14.57□□□□□ -0.08
TRIM56-204ENST00000487252 STARD7Q9NQZ5 370 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 PI4KBQ9UBF8 816 aa14.57□□□□□ -0.08
TRIM56-204ENST00000487252 EPOPA6NHQ4 379 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 FGBP02675 491 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 CSPP1Q1MSJ5 1256 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 NUP133Q8WUM0 1156 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 MAML3Q96JK9 1138 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 GNL3LQ9NVN8 582 aaKnown RBP14.56□□□□□ -0.08
TRIM56-204ENST00000487252 PDS5AQ29RF7 1337 aaKnown RBP14.56□□□□□ -0.08
TRIM56-204ENST00000487252 MROH7Q68CQ1 1323 aa14.56□□□□□ -0.08
TRIM56-204ENST00000487252 MOXD2PA6NHM9 499 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 SPDYE16A6NNV3 312 aaPredicted RBP14.55□□□□□ -0.08
TRIM56-204ENST00000487252 PHKA1P46020 1223 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 ABRAQ8N0Z2 381 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 SHCBP1Q8NEM2 672 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 KLHDC9Q8NEP7 349 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 MOV10L1Q9BXT6 1211 aaKnown RBP14.55□□□□□ -0.08
TRIM56-204ENST00000487252 ZBTB21Q9ULJ3 1066 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 ELP1O95163 1332 aa14.55□□□□□ -0.08
TRIM56-204ENST00000487252 ZFHX2Q9C0A1 2572 aaPredicted RBP14.53□□□□□ -0.08
TRIM56-204ENST00000487252 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
TRIM56-204ENST00000487252 EYA2O00167 538 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 MECOMQ03112 1051 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 OTOP2Q7RTS6 562 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 ATG9AQ7Z3C6 839 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 FAM126BQ8IXS8 530 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 ANKS1AQ92625 1134 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 DHX36Q9H2U1 1008 aaKnown RBP14.53□□□□□ -0.08
TRIM56-204ENST00000487252 SLC5A4Q9NY91 659 aa14.53□□□□□ -0.08
TRIM56-204ENST00000487252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.52□□□□□ -0.09
TRIM56-204ENST00000487252 DCXO43602 365 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 LPXNO60711 386 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 VAMP4O75379 141 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 GDF11O95390 407 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 CD4P01730 458 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 ZNF865P0CJ78 1059 aaPredicted RBP14.52□□□□□ -0.09
TRIM56-204ENST00000487252 VCAM1P19320 739 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 CYP2C18P33260 490 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 RFX5P48382 616 aaPredicted RBP14.52□□□□□ -0.09
TRIM56-204ENST00000487252 NCBP3Q53F19 620 aaKnown RBP14.52□□□□□ -0.09
TRIM56-204ENST00000487252 PPP1R12CQ9BZL4 782 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 SLC4A7Q9Y6M7 1214 aa14.52□□□□□ -0.09
TRIM56-204ENST00000487252 SYNRGQ9UMZ2 1314 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 CA3P07451 260 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 AKR1A1P14550 325 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 TAL1P17542 331 aaPredicted RBP14.51□□□□□ -0.09
TRIM56-204ENST00000487252 ERCC3P19447 782 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 RASGRF1Q13972 1273 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 KCNA10Q16322 511 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 LEXMQ3ZCV2 418 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 SPTY2D1Q68D10 685 aaPredicted RBP14.51□□□□□ -0.09
TRIM56-204ENST00000487252 HFE2Q6ZVN8 426 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 FOXP4Q8IVH2 680 aaPredicted RBP14.51□□□□□ -0.09
TRIM56-204ENST00000487252 SPATC1LQ9H0A9 340 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 KIAA1683Q9H0B3 1180 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
TRIM56-204ENST00000487252 ARVCFO00192 962 aa14.5□□□□□ -0.09
TRIM56-204ENST00000487252 CST5P28325 142 aaPredicted RBP14.5□□□□□ -0.09
TRIM56-204ENST00000487252 ATP2B3Q16720 1220 aa14.5□□□□□ -0.09
TRIM56-204ENST00000487252 PRSS33Q8NF86 280 aa14.5□□□□□ -0.09
TRIM56-204ENST00000487252 LENG1Q96BZ8 264 aaPredicted RBP14.5□□□□□ -0.09
TRIM56-204ENST00000487252 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
TRIM56-204ENST00000487252 FOCADQ5VW36 1801 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms