RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NOTOA8MTQ0 251 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 LRRN2O75325 713 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 PGRP06401 933 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 ETV3P41162 512 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 ZNF385BQ569K4 471 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 TTBK2Q6IQ55 1244 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 DTWD2Q8NBA8 298 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 TRIT1Q9H3H1 467 aaKnown RBP6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 CEP131Q9UPN4 1083 aa6.11□□□□□ -1.43
SNRNP27-204ENST00000487029 USP17L7P0C7H9 530 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 PI3P19957 117 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 MAPK8P45983 427 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 FBF1Q8TES7 1133 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 ACSF2Q96CM8 615 aaPredicted RBP6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 GPR160Q9UJ42 338 aa6.1□□□□□ -1.43
SNRNP27-204ENST00000487029 MAPK1P28482 360 aa6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 SV2BQ7L1I2 683 aa6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 PRRT2Q7Z6L0 340 aaPredicted RBP6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 MCATQ8IVS2 390 aaKnown RBP6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 FEZF2Q8TBJ5 459 aa6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 DACT3Q96B18 629 aaPredicted RBP6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 EPB41L4AQ9HCS5 686 aaPredicted RBP6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 GPATCH2Q9NW75 528 aa6.09□□□□□ -1.43
SNRNP27-204ENST00000487029 ERCC3P19447 782 aa6.08□□□□□ -1.44
SNRNP27-204ENST00000487029 LTKP29376 864 aa6.08□□□□□ -1.44
SNRNP27-204ENST00000487029 C12orf49Q9H741 205 aa6.08□□□□□ -1.44
SNRNP27-204ENST00000487029 MBD1Q9UIS9 605 aaPredicted RBP6.08□□□□□ -1.44
SNRNP27-204ENST00000487029 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
SNRNP27-204ENST00000487029 SHISA3A0PJX4 238 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 UPK3BL1B0FP48 263 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 UPK3BL2E5RIL1 263 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 GIPC1O14908 333 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 EPHB3P54753 998 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 TEKQ02763 1124 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 FMR1Q06787 632 aaKnown RBP eCLIP6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 VMACQ2NL98 169 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 DNAJC14Q6Y2X3 702 aaPredicted RBP6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 LINC01599Q8WXQ3 324 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 G6PC3Q9BUM1 346 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 FAM8A1Q9UBU6 413 aa6.07□□□□□ -1.44
SNRNP27-204ENST00000487029 RFXAPO00287 272 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 SNX17Q15036 470 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 NPM2Q86SE8 214 aaKnown RBP6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 SPPL2CQ8IUH8 684 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 ZDHHC14Q8IZN3 488 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 SYT8Q8NBV8 401 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 DHX38Q92620 1227 aaKnown RBP6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 TTF2Q9UNY4 1162 aaKnown RBP6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 ZNF281Q9Y2X9 895 aa6.06□□□□□ -1.44
SNRNP27-204ENST00000487029 SLC22A31A6NKX4 558 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 SASH1O94885 1247 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 SRSF3P84103 164 aaKnown RBP6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 ADGRF1Q5T601 910 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 ALG1LQ6GMV1 187 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 NLRX1Q86UT6 975 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 TMEM151BQ8IW70 566 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 SIGLEC10Q96LC7 697 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 CORINQ9Y5Q5 1042 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 IRAK3Q9Y616 596 aa6.05□□□□□ -1.44
SNRNP27-204ENST00000487029 CELA3BP08861 270 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 SDHBP21912 280 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 AFF3P51826 1226 aaKnown RBP6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 RPS26P62854 115 aaKnown RBP6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 CHRNEQ04844 493 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 MAP3K11Q16584 847 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 ZSCAN29Q8IWY8 852 aaPredicted RBP6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 CNTD2Q9H8S5 307 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 SPG7Q9UQ90 795 aa6.04□□□□□ -1.44
SNRNP27-204ENST00000487029 ANKRD33BA6NCL7 494 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 OR14I1A6ND48 311 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 CYB5D2Q8WUJ1 264 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 ASB16Q96NS5 453 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 ADAM7Q9H2U9 754 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 KCNH3Q9ULD8 1083 aa6.03□□□□□ -1.44
SNRNP27-204ENST00000487029 RBM47A0AV96 593 aaKnown RBP6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 USP2O75604 605 aaPredicted RBP6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 TFE3P19532 575 aaPredicted RBP6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 VIPR1P32241 457 aa6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 DUSP4Q13115 394 aa6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 CCDC85BQ15834 202 aaPredicted RBP6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 TMEFF1Q8IYR6 380 aa6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 ADAM30Q9UKF2 790 aa6.02□□□□□ -1.45
SNRNP27-204ENST00000487029 ADRB1P08588 477 aa6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 PDE4BQ07343 736 aa6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 RNF141Q8WVD5 230 aa6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 SYTL4Q96C24 671 aaPredicted RBP6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 TMPRSS5Q9H3S3 457 aa6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 SIRT5Q9NXA8 310 aa6.01□□□□□ -1.45
SNRNP27-204ENST00000487029 IRS4O14654 1257 aaPredicted RBP6□□□□□ -1.45
SNRNP27-204ENST00000487029 N4BP3O15049 544 aa6□□□□□ -1.45
SNRNP27-204ENST00000487029 LIG3P49916 1009 aa6□□□□□ -1.45
SNRNP27-204ENST00000487029 CDR1P51861 262 aa6□□□□□ -1.45
SNRNP27-204ENST00000487029 RPL6Q02878 288 aaKnown RBP6□□□□□ -1.45
SNRNP27-204ENST00000487029 FAM13CQ8NE31 585 aa6□□□□□ -1.45
SNRNP27-204ENST00000487029 JARID2Q92833 1246 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms