RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ADAMTS10Q9H324 1103 aa6.74□□□□□ -1.33
SNRNP40-205ENST00000486941 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
SNRNP40-205ENST00000486941 TACC3Q9Y6A5 838 aa6.74□□□□□ -1.33
SNRNP40-205ENST00000486941 UGGT2Q9NYU1 1516 aa6.74□□□□□ -1.33
SNRNP40-205ENST00000486941 KDM5BQ9UGL1 1544 aa6.74□□□□□ -1.33
SNRNP40-205ENST00000486941 TSPAN15O95858 294 aa6.73□□□□□ -1.33
SNRNP40-205ENST00000486941 SRFP11831 508 aa6.73□□□□□ -1.33
SNRNP40-205ENST00000486941 TTC6Q86TZ1 520 aa6.73□□□□□ -1.33
SNRNP40-205ENST00000486941 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
SNRNP40-205ENST00000486941 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
SNRNP40-205ENST00000486941 EPRSP07814 1512 aaKnown RBP6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 ANKRD33BA6NCL7 494 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 F6X3S4 739 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 LRRN2O75325 713 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 TRHRP34981 398 aaPredicted RBP6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 RAP1GAPP47736 663 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 SLC6A19Q695T7 634 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 JARID2Q92833 1246 aaPredicted RBP6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 CEP131Q9UPN4 1083 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 MAP3K4Q9Y6R4 1608 aa6.72□□□□□ -1.33
SNRNP40-205ENST00000486941 KIR3DL1P43629 444 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 RPL6Q02878 288 aaKnown RBP6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 MPZL3Q6UWV2 235 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 BNC2Q6ZN30 1099 aaPredicted RBP6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 PHC3Q8NDX5 983 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 FAM161BQ96MY7 647 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 TRAIPQ9BWF2 469 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 MIR1-1HGQ9H1L0 117 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 PARP2Q9UGN5 583 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 EBF1Q9UH73 591 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 KIAA0556O60303 1618 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 ZCCHC11Q5TAX3 1644 aaKnown RBP6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 TEX14Q8IWB6 1497 aa6.71□□□□□ -1.34
SNRNP40-205ENST00000486941 FAM221AA4D161 298 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 HPXP02790 462 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 HK2P52789 917 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 TAGLNQ01995 201 aaKnown RBP6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 TSNAXIP1Q2TAA8 658 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 TIGD5Q53EQ6 642 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 ZNF746Q6NUN9 644 aaPredicted RBP6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 CREG2Q8IUH2 290 aa6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 PIWIL2Q8TC59 973 aaKnown RBP6.7□□□□□ -1.34
SNRNP40-205ENST00000486941 CTTNBP2Q8WZ74 1663 aa6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 DNAJA2O60884 412 aa6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 TPP2P29144 1249 aaPredicted RBP6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 LRRC56Q8IYG6 542 aaPredicted RBP6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 ABHD4Q8TB40 342 aa6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 TMEM59LQ9UK28 342 aa6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 ADAM30Q9UKF2 790 aa6.69□□□□□ -1.34
SNRNP40-205ENST00000486941 ADGRL1O94910 1474 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 GOLGA3Q08378 1498 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 WDR7Q9Y4E6 1490 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 CILPO75339 1184 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 CYP7A1P22680 504 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 DAB2P98082 770 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 DNAJC14Q6Y2X3 702 aaPredicted RBP6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 TMPRSS7Q7RTY8 843 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 COX4I2Q96KJ9 171 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 C19orf44Q9H6X5 657 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 USP31Q70CQ4 1352 aa6.68□□□□□ -1.34
SNRNP40-205ENST00000486941 EFEMP2O95967 443 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 F13A1P00488 732 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 ZGLP1P0C6A0 271 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 TAF1CQ15572 869 aaPredicted RBP6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 EAPPQ56P03 285 aaPredicted RBP6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 ERICH6Q7L0X2 663 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 FBXO15Q8NCQ5 510 aaPredicted RBP6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 GPR62Q9BZJ7 368 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 POLR3KQ9Y2Y1 108 aaPredicted RBP6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 CFAP43Q8NDM7 1665 aa6.67□□□□□ -1.34
SNRNP40-205ENST00000486941 MAGI3Q5TCQ9 1506 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 ABCA8O94911 1581 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 SHISA3A0PJX4 238 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 CHURC1-FNTBB4DL54 471 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 PF4P02776 101 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 PLCG1P19174 1290 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 CAMK2GQ13555 558 aaPredicted RBP6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 TMEM201Q5SNT2 666 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 FAM9AQ8IZU1 332 aaPredicted RBP6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 MYLIPQ8WY64 445 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 CD109Q6YHK3 1445 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 PRXQ9BXM0 1461 aa6.66□□□□□ -1.34
SNRNP40-205ENST00000486941 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 ETV2O00321 342 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 ETV3P41162 512 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 ST13P50502 369 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 PDE4BQ07343 736 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 FBXO33Q7Z6M2 555 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 TSPYL5Q86VY4 417 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 ANKLE2Q86XL3 938 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 BAHD1Q8TBE0 780 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 VWCEQ96DN2 955 aa6.65□□□□□ -1.34
SNRNP40-205ENST00000486941 RHOVQ96L33 236 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms