RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
SEMA4D-219ENST00000486935 STRBPQ96SI9 672 aaKnown RBP18.42■□□□□ 0.54
SEMA4D-219ENST00000486935 PAK6Q9NQU5 681 aaPredicted RBP18.42■□□□□ 0.54
SEMA4D-219ENST00000486935 DIAPH3Q9NSV4 1193 aa18.42■□□□□ 0.54
SEMA4D-219ENST00000486935 FARP2O94887 1054 aaPredicted RBP18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 CCNA1P78396 465 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 CASC1Q6TDU7 716 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 GPR142Q7Z601 462 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 UBE2Q1Q7Z7E8 422 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
SEMA4D-219ENST00000486935 H0YGN5 161 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 RNF113AO15541 343 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 CHMLP26374 656 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 LRRFIP1Q32MZ4 808 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 WDR78Q5VTH9 848 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 C16orf86Q6ZW13 317 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 CLEC10AQ8IUN9 316 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 SIAH1Q8IUQ4 282 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 TRIB2Q92519 343 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 TANGO6Q9C0B7 1094 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
SEMA4D-219ENST00000486935 HIP1O00291 1037 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 COG2Q14746 738 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 C8orf34Q49A92 452 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 KIAA1755Q5JYT7 1200 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 MORN1Q5T089 497 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 APPBP2Q92624 585 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 USP6NLQ92738 828 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 HTATIP2Q9BUP3 242 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 ARHGEF10LQ9HCE6 1279 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 HOXC10Q9NYD6 342 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 RPTORQ8N122 1335 aa18.39■□□□□ 0.53
SEMA4D-219ENST00000486935 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 GSG1L2A8MUP6 293 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 ZFYP08048 801 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 CAPN2P17655 700 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 RGS2P41220 211 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 ATP2B2Q01814 1243 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 ICA1Q05084 483 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 CWC27Q6UX04 472 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 LBX2Q6XYB7 198 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 SPICE1Q8N0Z3 855 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 STK11IPQ8N1F8 1099 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 CRISPLD2Q9H0B8 497 aa18.38■□□□□ 0.53
SEMA4D-219ENST00000486935 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 APPP05067 770 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 PRKAR2AP13861 404 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 CCL14Q16627 93 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 HABP4Q5JVS0 413 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 TRMT44Q8IYL2 757 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 ARPP21Q9UBL0 812 aaPredicted RBP18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 TMX2Q9Y320 296 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
SEMA4D-219ENST00000486935 A0A0D9SFI3 127 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 MAP2K5Q13163 448 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 SBK1Q52WX2 424 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 GIMAP6Q6P9H5 292 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 LPAR1Q92633 364 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 VCPKMTQ9H867 229 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
SEMA4D-219ENST00000486935 SLC15A5A6NIM6 579 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 M0R2C6 588 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 GPAA1O43292 621 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 PTPREP23469 700 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 CACNB2Q08289 660 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 ZMYM1Q5SVZ6 1142 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 MAP3K21Q5TCX8 1036 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 APBA2Q99767 749 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 COLQQ9Y215 455 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
SEMA4D-219ENST00000486935 PATL2C9JE40 543 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 RAD21O60216 631 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 FLOT1O75955 427 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 GNAT2P19087 354 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 DSG3P32926 999 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 TDO2P48775 406 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 NECAB2Q7Z6G3 386 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 DIS3LQ8TF46 1054 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 SEC62Q99442 399 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 MOV10L1Q9BXT6 1211 aaKnown RBP18.34■□□□□ 0.53
SEMA4D-219ENST00000486935 PLS1Q14651 629 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms