RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CYP7A1P22680 504 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 DEKP35659 375 aaKnown RBP7.44□□□□□ -1.22
COPS3-209ENST00000486810 MLECQ14165 292 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 RUFY4Q6ZNE9 571 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 TMEM192Q8IY95 271 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 STK11IPQ8N1F8 1099 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 DTWD2Q8NBA8 298 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 RBBP8NLQ8NC74 664 aaPredicted RBP7.44□□□□□ -1.22
COPS3-209ENST00000486810 NAP1L5Q96NT1 182 aaPredicted RBP7.44□□□□□ -1.22
COPS3-209ENST00000486810 CCSER2Q9H7U1 834 aa7.44□□□□□ -1.22
COPS3-209ENST00000486810 FAM155AB1AL88 458 aaPredicted RBP7.43□□□□□ -1.22
COPS3-209ENST00000486810 H3BS24 57 aa7.43□□□□□ -1.22
COPS3-209ENST00000486810 GBP1P32455 592 aa7.43□□□□□ -1.22
COPS3-209ENST00000486810 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
COPS3-209ENST00000486810 LSRQ86X29 649 aaPredicted RBP7.43□□□□□ -1.22
COPS3-209ENST00000486810 FBXL18Q96ME1 805 aa7.43□□□□□ -1.22
COPS3-209ENST00000486810 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
COPS3-209ENST00000486810 DUSP15Q9H1R2 295 aaPredicted RBP7.43□□□□□ -1.22
COPS3-209ENST00000486810 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
COPS3-209ENST00000486810 E9PSI1 815 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 SRFP11831 508 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 NASPP49321 788 aaPredicted RBP7.42□□□□□ -1.22
COPS3-209ENST00000486810 COL9A2Q14055 689 aaPredicted RBP7.42□□□□□ -1.22
COPS3-209ENST00000486810 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 PIWIL2Q8TC59 973 aaKnown RBP7.42□□□□□ -1.22
COPS3-209ENST00000486810 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 ADAMTS6Q9UKP5 1117 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 INPP5FQ9Y2H2 1132 aa7.42□□□□□ -1.22
COPS3-209ENST00000486810 A0A0U1RQG5 324 aaPredicted RBP7.41□□□□□ -1.22
COPS3-209ENST00000486810 IMPDH2P12268 514 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 FUT4P22083 530 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 ZYXQ15942 572 aaKnown RBP7.41□□□□□ -1.22
COPS3-209ENST00000486810 NBPF12Q5TAG4 269 aaPredicted RBP7.41□□□□□ -1.22
COPS3-209ENST00000486810 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
COPS3-209ENST00000486810 SPATA32Q96LK8 384 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 ASPNQ9BXN1 380 aa7.41□□□□□ -1.22
COPS3-209ENST00000486810 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 GIPRP48546 466 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 INTS3Q68E01 1043 aaKnown RBP7.4□□□□□ -1.22
COPS3-209ENST00000486810 CBLL1Q75N03 491 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 TAB3Q8N5C8 712 aaPredicted RBP7.4□□□□□ -1.22
COPS3-209ENST00000486810 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 SHDQ96IW2 340 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 GPR62Q9BZJ7 368 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 ZSWIM5Q9P217 1185 aa7.4□□□□□ -1.22
COPS3-209ENST00000486810 FAM86C2PA6NEL3 165 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 ESR1P03372 595 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 ATF4P18848 351 aaPredicted RBP7.39□□□□□ -1.23
COPS3-209ENST00000486810 CCNFP41002 786 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 SNW1Q13573 536 aaKnown RBP7.39□□□□□ -1.23
COPS3-209ENST00000486810 GAB4Q2WGN9 574 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 SEC16BQ96JE7 1060 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 SLC6A18Q96N87 628 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 SRRTQ9BXP5 876 aaKnown RBP7.39□□□□□ -1.23
COPS3-209ENST00000486810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.39□□□□□ -1.23
COPS3-209ENST00000486810 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
COPS3-209ENST00000486810 MBNL3Q9NUK0 354 aaKnown RBP7.39□□□□□ -1.23
COPS3-209ENST00000486810 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 LTBP3Q9NS15 1303 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
COPS3-209ENST00000486810 IKZF1Q13422 519 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 FAM169BQ8N8A8 192 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 AGBL5Q8NDL9 886 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
COPS3-209ENST00000486810 C9IYK1 514 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 CLEC3AO75596 197 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 GUCY2CP25092 1073 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 EIF6P56537 245 aaKnown RBP7.37□□□□□ -1.23
COPS3-209ENST00000486810 PLCL1Q15111 1095 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 NBPF9Q3BBW0 867 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 ZNF792Q3KQV3 632 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 ANGEL2Q5VTE6 544 aaKnown RBP7.37□□□□□ -1.23
COPS3-209ENST00000486810 UNC5AQ6ZN44 842 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 PPFIBP1Q86W92 1011 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 CARS2Q9HA77 564 aaKnown RBP7.37□□□□□ -1.23
COPS3-209ENST00000486810 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
COPS3-209ENST00000486810 TPP2P29144 1249 aaPredicted RBP7.36□□□□□ -1.23
COPS3-209ENST00000486810 ZP2Q05996 745 aa7.36□□□□□ -1.23
COPS3-209ENST00000486810 TMC3Q7Z5M5 1100 aa7.36□□□□□ -1.23
COPS3-209ENST00000486810 TSPYL5Q86VY4 417 aaPredicted RBP7.36□□□□□ -1.23
COPS3-209ENST00000486810 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
COPS3-209ENST00000486810 SHOXO15266 292 aa7.35□□□□□ -1.23
COPS3-209ENST00000486810 RNF4P78317 190 aa7.35□□□□□ -1.23
COPS3-209ENST00000486810 PRDM14Q9GZV8 571 aa7.35□□□□□ -1.23
COPS3-209ENST00000486810 LMCD1Q9NZU5 365 aa7.35□□□□□ -1.23
COPS3-209ENST00000486810 MINPP1Q9UNW1 487 aa7.35□□□□□ -1.23
COPS3-209ENST00000486810 A0A1W2PQH9 124 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
COPS3-209ENST00000486810 SLC23A3Q6PIS1 610 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 TTC6Q86TZ1 520 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 PI4K2BQ8TCG2 481 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 HDAC8Q9BY41 377 aa7.34□□□□□ -1.23
COPS3-209ENST00000486810 C19orf73Q9NVV2 129 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms