RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
GSDMB-210ENST00000486560 HPS5Q9UPZ3 1129 aa14.22□□□□□ -0.13
GSDMB-210ENST00000486560 MYPNQ86TC9 1320 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 ADGRA2Q96PE1 1338 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 PLXNB2O15031 1838 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 FGAP02671 866 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 HOXD10P28358 340 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
GSDMB-210ENST00000486560 HERVK_113P62684 666 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 PLS1Q14651 629 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 BIN2Q9UBW5 565 aaPredicted RBP14.21□□□□□ -0.13
GSDMB-210ENST00000486560 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 PTCH2Q9Y6C5 1203 aa14.21□□□□□ -0.13
GSDMB-210ENST00000486560 ZNF213O14771 459 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 FOXP2O15409 715 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 FLOT1O75955 427 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 BCRP11274 1271 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 SOX10P56693 466 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 CAP1Q01518 475 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
GSDMB-210ENST00000486560 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
GSDMB-210ENST00000486560 COA7Q96BR5 231 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 TRIM47Q96LD4 638 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 STX8Q9UNK0 236 aa14.2□□□□□ -0.14
GSDMB-210ENST00000486560 CTGFP29279 349 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 HOXA7P31268 230 aaPredicted RBP14.19□□□□□ -0.14
GSDMB-210ENST00000486560 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 FAM83BQ5T0W9 1011 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 MFSD6Q6ZSS7 791 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 CEP95Q96GE4 821 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
GSDMB-210ENST00000486560 CTDP1Q9Y5B0 961 aaPredicted RBP14.19□□□□□ -0.14
GSDMB-210ENST00000486560 NMT2O60551 498 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 TTLL1O95922 423 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 CHMLP26374 656 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 ALX1Q15699 326 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 IMMTQ16891 758 aaKnown RBP14.18□□□□□ -0.14
GSDMB-210ENST00000486560 KIAA1755Q5JYT7 1200 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 GPRC5AQ8NFJ5 357 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 SH3TC2Q8TF17 1288 aa14.18□□□□□ -0.14
GSDMB-210ENST00000486560 NUP88Q99567 741 aaPredicted RBP14.18□□□□□ -0.14
GSDMB-210ENST00000486560 RAD50Q92878 1312 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 ERVK-9P63128 1117 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 ERVK-24P63145 666 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 PRKCZQ05513 592 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 KIAA1211Q6ZU35 1233 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 NEDD1Q8NHV4 660 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 GTF3C2Q8WUA4 911 aaPredicted RBP14.17□□□□□ -0.14
GSDMB-210ENST00000486560 LPAR1Q92633 364 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 IL25Q9H293 177 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 TXNRD2Q9NNW7 524 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 NYAP2Q9P242 653 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 SRRDQ9UH36 339 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 GABRQQ9UN88 632 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 RLFQ13129 1914 aa14.17□□□□□ -0.14
GSDMB-210ENST00000486560 ZNFX1Q9P2E3 1918 aaKnown RBP14.17□□□□□ -0.14
GSDMB-210ENST00000486560 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
GSDMB-210ENST00000486560 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
GSDMB-210ENST00000486560 GNRH1P01148 92 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 CCNA1P78396 465 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 COG2Q14746 738 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 AKNAD1Q5T1N1 836 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 NBPF11Q86T75 865 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 SIAH1Q8IUQ4 282 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 ATG4CQ96DT6 458 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 ZKSCAN3Q9BRR0 538 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 DSCC1Q9BVC3 393 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.16□□□□□ -0.14
GSDMB-210ENST00000486560 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
GSDMB-210ENST00000486560 MTMR4Q9NYA4 1195 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
GSDMB-210ENST00000486560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
GSDMB-210ENST00000486560 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 NEDD4P46934 1319 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 MYH6P13533 1939 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 F5H6K3 240 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 NDUFB10O96000 172 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 PRMT2P55345 433 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 KLRC3Q07444 240 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 CCDC96Q2M329 555 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 SLFN13Q68D06 897 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 ESR2Q92731 530 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 HOXC10Q9NYD6 342 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 RBPJLQ9UBG7 517 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 TACC3Q9Y6A5 838 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 IVNS1ABPQ9Y6Y0 642 aa14.15□□□□□ -0.14
GSDMB-210ENST00000486560 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
GSDMB-210ENST00000486560 B4E1Z4 1266 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms