RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 KIAA0100Q14667 2235 aaKnown RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
COL12A1-208ENST00000486533 COL2A1P02458 1487 aaPredicted RBP10.57□□□□□ -0.72
COL12A1-208ENST00000486533 TBC1D12O60347 775 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PTMAP06454 111 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 TPM3P06753 285 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PDCP20941 246 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 MOGSQ13724 837 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 VPS53Q5VIR6 699 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 ADGRA1Q86SQ6 560 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 TGFBRAP1Q8WUH2 860 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PARK7Q99497 189 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 ARHGAP39Q9C0H5 1083 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PIH1D3Q9NQM4 214 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 NDUFB9Q9Y6M9 179 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PTPRFP10586 1907 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CDK5RAP2Q96SN8 1893 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 A0A0G2JLL6 359 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 SYCE3A1L190 88 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 ZSCAN22P10073 491 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CYP2C8P10632 490 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 UBE2HP62256 183 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 SLC9C1Q4G0N8 1177 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 FASTKD5Q7L8L6 764 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PRRT2Q7Z6L0 340 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 MTERF4Q7Z6M4 381 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CCDC84Q86UT8 332 aaPredicted RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 DHX36Q9H2U1 1008 aaKnown RBP10.56□□□□□ -0.72
COL12A1-208ENST00000486533 ZKSCAN5Q9Y2L8 839 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 AFG3L2Q9Y4W6 797 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 PTCH2Q9Y6C5 1203 aa10.56□□□□□ -0.72
COL12A1-208ENST00000486533 CYP7A1P22680 504 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 PKP1Q13835 747 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 GPAT2Q6NUI2 795 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 C17orf99Q6UX52 265 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 NBPF11Q86T75 865 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 TICAM2Q86XR7 235 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 MAGEB6Q8N7X4 407 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 TRIM34Q9BYJ4 488 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 LSG1Q9H089 658 aaKnown RBP10.55□□□□□ -0.72
COL12A1-208ENST00000486533 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 PI4KBQ9UBF8 816 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 HERC5Q9UII4 1024 aaKnown RBP10.55□□□□□ -0.72
COL12A1-208ENST00000486533 PALD1Q9ULE6 856 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 FOCADQ5VW36 1801 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 FLT1P17948 1338 aa10.55□□□□□ -0.72
COL12A1-208ENST00000486533 STX6O43752 255 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 IGSF3O75054 1194 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 MYCP01106 439 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 GNRH1P01148 92 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 PSMC4P43686 418 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 PPP4CP60510 307 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 DYNLL1P63167 89 aaKnown RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 SLC4A8Q2Y0W8 1093 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 CRACR2BQ8N4Y2 399 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 MIGA1Q8NAN2 632 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 SMCR8Q8TEV9 937 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 ARMC5Q96C12 935 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 SAP30BPQ9UHR5 308 aaKnown RBP10.54□□□□□ -0.72
COL12A1-208ENST00000486533 ADGRA2Q96PE1 1338 aa10.54□□□□□ -0.72
COL12A1-208ENST00000486533 FMNL1O95466 1100 aaPredicted RBP10.53□□□□□ -0.72
COL12A1-208ENST00000486533 CAP2P40123 477 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 SPP2Q13103 211 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 MMRN1Q13201 1228 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 KRT32Q14532 448 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 HS6ST3Q8IZP7 471 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 KCNB2Q92953 911 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 ZNF333Q96JL9 665 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 TTC14Q96N46 770 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 UPF3BQ9BZI7 483 aaKnown RBP10.53□□□□□ -0.72
COL12A1-208ENST00000486533 PDRG1Q9NUG6 133 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 CCDC171Q6TFL3 1326 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
COL12A1-208ENST00000486533 RBBP6Q7Z6E9 1792 aaKnown RBP10.53□□□□□ -0.72
COL12A1-208ENST00000486533 F13A1P00488 732 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 HLA-DOAP06340 250 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 HOXD10P28358 340 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 CTGFP29279 349 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 USP5P45974 858 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 RRP1BQ14684 758 aaKnown RBP10.52□□□□□ -0.72
COL12A1-208ENST00000486533 CERS3Q8IU89 383 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.72
COL12A1-208ENST00000486533 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms