RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 PTPDC1A2A3K4 754 aa15.42■□□□□ 0.06
VTI1BP1-201ENST00000486325 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
VTI1BP1-201ENST00000486325 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
VTI1BP1-201ENST00000486325 NTRK3Q16288 839 aa15.42■□□□□ 0.06
VTI1BP1-201ENST00000486325 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
VTI1BP1-201ENST00000486325 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 PALM3A6NDB9 673 aaPredicted RBP15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 GPATCH4Q5T3I0 446 aaKnown RBP15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 SIAH1Q8IUQ4 282 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 DCAF4Q8WV16 495 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 RNF26Q9BY78 433 aaPredicted RBP15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 PICK1Q9NRD5 415 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 ORC3Q9UBD5 711 aaPredicted RBP15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 STK36Q9NRP7 1315 aa15.41■□□□□ 0.06
VTI1BP1-201ENST00000486325 USP17L5A8MUK1 530 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 JAK2O60674 1132 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 USP2O75604 605 aaPredicted RBP15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 SNHG28P0DPA3 235 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 SYT1P21579 422 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 IREB2P48200 963 aaKnown RBP15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 JAG1P78504 1218 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 MAP3K9P80192 1104 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 TMTC3Q6ZXV5 915 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 LDHDQ86WU2 507 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 SCYL3Q8IZE3 742 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 DDX11Q96FC9 970 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
VTI1BP1-201ENST00000486325 GREB1LQ9C091 1923 aaPredicted RBP15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 F5H6K3 240 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 STX6O43752 255 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 DEXIO95424 95 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 PDHBP11177 359 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 KLRC3Q07444 240 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 NOL9Q5SY16 702 aaKnown RBP15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 SLFN13Q68D06 897 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 LRRC47Q8N1G4 583 aaKnown RBP15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 CDCA5Q96FF9 252 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
VTI1BP1-201ENST00000486325 UNCXA6NJT0 531 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 H3BQV1 296 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 FDPSP14324 419 aaKnown RBP15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 XBP1P17861 261 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 NBPF11Q86T75 865 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 CLEC10AQ8IUN9 316 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 GLIS2Q9BZE0 524 aaPredicted RBP15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
VTI1BP1-201ENST00000486325 INPP5BP32019 993 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 SLC1A4P43007 532 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 USP14P54578 494 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 ZNF543Q08ER8 600 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 FUT2Q10981 343 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 MAP3K11Q16584 847 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 USP17L2Q6R6M4 530 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 CCDC82Q8N4S0 544 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 SRBD1Q8N5C6 995 aaKnown RBP15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 PHKBQ93100 1093 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 CSADQ9Y600 493 aa15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 V9GY48 417 aaPredicted RBP15.37■□□□□ 0.05
VTI1BP1-201ENST00000486325 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 RAD21O60216 631 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 PLEKHA8P1O95397 391 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 BRD1O95696 1058 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 PTPRAP18433 802 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 TRIM29Q14134 588 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 TTLL12Q14166 644 aaPredicted RBP15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 STAG2Q8N3U4 1231 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 ZKSCAN4Q969J2 545 aaPredicted RBP15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 C8orf76Q96K31 380 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 ALG1Q9BT22 464 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 KIAA1683Q9H0B3 1180 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
VTI1BP1-201ENST00000486325 C19orf81C9J6K1 198 aa15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 USP17L10C9JJH3 530 aa15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 NDUFB10O96000 172 aa15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 ZSCAN22P10073 491 aaPredicted RBP15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 BMP3P12645 472 aa15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 FKBP1BP68106 108 aa15.35■□□□□ 0.05
VTI1BP1-201ENST00000486325 PRKG1Q13976 671 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms