RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 MKNK2Q9HBH9 465 aa26.28■■□□□ 1.8
HLA-F-228ENST00000486194 STAP2Q9UGK3 403 aa26.28■■□□□ 1.8
HLA-F-228ENST00000486194 ROBO3Q96MS0 1386 aa26.28■■□□□ 1.8
HLA-F-228ENST00000486194 MYH8P13535 1937 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 MINDY4BA8MYZ0 360 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 PATL2C9JE40 543 aaKnown RBP26.27■■□□□ 1.8
HLA-F-228ENST00000486194 SMIM22K7EJ46 135 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 M0R2C6 588 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 SGPL1O95470 568 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 POTEEQ6S8J3 1075 aa26.27■■□□□ 1.8
HLA-F-228ENST00000486194 CNMDO75829 334 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 CYP2B6P20813 491 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 RGS2P41220 211 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 ZMYM1Q5SVZ6 1142 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 SIAH1Q8IUQ4 282 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 MB21D1Q8N884 522 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 EVI5LQ96CN4 794 aa26.26■■□□□ 1.79
HLA-F-228ENST00000486194 PAK6Q9NQU5 681 aaPredicted RBP26.26■■□□□ 1.79
HLA-F-228ENST00000486194 WDR46O15213 610 aaKnown RBP26.25■■□□□ 1.79
HLA-F-228ENST00000486194 EEF2P13639 858 aaKnown RBP26.25■■□□□ 1.79
HLA-F-228ENST00000486194 PDE1AP54750 535 aa26.25■■□□□ 1.79
HLA-F-228ENST00000486194 ATP2B2Q01814 1243 aa26.25■■□□□ 1.79
HLA-F-228ENST00000486194 CLEC10AQ8IUN9 316 aa26.25■■□□□ 1.79
HLA-F-228ENST00000486194 EPB41L4AQ9HCS5 686 aaPredicted RBP26.25■■□□□ 1.79
HLA-F-228ENST00000486194 GOPCQ9HD26 462 aa26.25■■□□□ 1.79
HLA-F-228ENST00000486194 HMX1Q9NP08 348 aaPredicted RBP26.25■■□□□ 1.79
HLA-F-228ENST00000486194 IVNS1ABPQ9Y6Y0 642 aa26.25■■□□□ 1.79
HLA-F-228ENST00000486194 DOCK3Q8IZD9 2030 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 RPTORQ8N122 1335 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 MORN1Q5T089 497 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 WDR78Q5VTH9 848 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 TICAM2Q86XR7 235 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 IFNL3Q8IZI9 196 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 DEFB118Q96PH6 123 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.24■■□□□ 1.79
HLA-F-228ENST00000486194 BTBD7Q9P203 1132 aa26.24■■□□□ 1.79
HLA-F-228ENST00000486194 FLOT1O75955 427 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 TFRCP02786 760 aaKnown RBP26.23■■□□□ 1.79
HLA-F-228ENST00000486194 SLC3A2P08195 630 aaKnown RBP26.23■■□□□ 1.79
HLA-F-228ENST00000486194 ZKSCAN1P17029 563 aaPredicted RBP26.23■■□□□ 1.79
HLA-F-228ENST00000486194 RASA1P20936 1047 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 SPICE1Q8N0Z3 855 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 TRIB2Q92519 343 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 USP6NLQ92738 828 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 APBA2Q99767 749 aa26.23■■□□□ 1.79
HLA-F-228ENST00000486194 SLC15A5A6NIM6 579 aa26.22■■□□□ 1.79
HLA-F-228ENST00000486194 KIAA1755Q5JYT7 1200 aa26.22■■□□□ 1.79
HLA-F-228ENST00000486194 SMC5Q8IY18 1101 aa26.22■■□□□ 1.79
HLA-F-228ENST00000486194 ZNF444Q8N0Y2 327 aaPredicted RBP26.22■■□□□ 1.79
HLA-F-228ENST00000486194 SEC62Q99442 399 aaKnown RBP26.22■■□□□ 1.79
HLA-F-228ENST00000486194 HTATIP2Q9BUP3 242 aa26.22■■□□□ 1.79
HLA-F-228ENST00000486194 NAPBQ9H115 298 aa26.22■■□□□ 1.79
HLA-F-228ENST00000486194 FARP2O94887 1054 aaPredicted RBP26.21■■□□□ 1.79
HLA-F-228ENST00000486194 DSG3P32926 999 aa26.21■■□□□ 1.79
HLA-F-228ENST00000486194 MAP2K5Q13163 448 aa26.21■■□□□ 1.79
HLA-F-228ENST00000486194 STK11IPQ8N1F8 1099 aa26.21■■□□□ 1.79
HLA-F-228ENST00000486194 BRCA2P51587 3418 aa26.21■■□□□ 1.79
HLA-F-228ENST00000486194 PTPREP23469 700 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 PDE4BQ07343 736 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 UBE2Q1Q7Z7E8 422 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 SHCBP1Q8NEM2 672 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 LNPKQ9C0E8 428 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 SPATC1LQ9H0A9 340 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 CRISPLD2Q9H0B8 497 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 NYAP2Q9P242 653 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 PLXNB2O15031 1838 aa26.2■■□□□ 1.78
HLA-F-228ENST00000486194 MAP3K21Q5TCX8 1036 aa26.19■■□□□ 1.78
HLA-F-228ENST00000486194 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.19■■□□□ 1.78
HLA-F-228ENST00000486194 STRNO43815 780 aa26.18■■□□□ 1.78
HLA-F-228ENST00000486194 RAD21O60216 631 aa26.18■■□□□ 1.78
HLA-F-228ENST00000486194 PRKAR2AP13861 404 aaKnown RBP26.18■■□□□ 1.78
HLA-F-228ENST00000486194 EXOC6Q8TAG9 804 aa26.18■■□□□ 1.78
HLA-F-228ENST00000486194 MOV10L1Q9BXT6 1211 aaKnown RBP26.18■■□□□ 1.78
HLA-F-228ENST00000486194 HELLSQ9NRZ9 838 aa26.18■■□□□ 1.78
HLA-F-228ENST00000486194 TRIM32Q13049 653 aa26.17■■□□□ 1.78
HLA-F-228ENST00000486194 GRB14Q14449 540 aa26.17■■□□□ 1.78
HLA-F-228ENST00000486194 ANKLE1Q8NAG6 615 aa26.17■■□□□ 1.78
HLA-F-228ENST00000486194 ATG4CQ96DT6 458 aa26.17■■□□□ 1.78
HLA-F-228ENST00000486194 MROH8Q9H579 483 aa26.17■■□□□ 1.78
HLA-F-228ENST00000486194 HOXC6P09630 235 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 PPARAQ07869 468 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 PLS1Q14651 629 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 MFSD14CQ5VZR4 134 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 B4GALNT3Q6L9W6 998 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 CHD1LQ86WJ1 897 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 DPF3Q92784 378 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 SYNPO2Q9UMS6 1093 aa26.16■■□□□ 1.78
HLA-F-228ENST00000486194 PRDM1O75626 825 aa26.15■■□□□ 1.78
HLA-F-228ENST00000486194 A0A0G2JMZ2 1700 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 GREB1LQ9C091 1923 aaPredicted RBP26.14■■□□□ 1.78
HLA-F-228ENST00000486194 IGKV6D-41A0A0C4DH26 115 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 SLC25A27O95847 323 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 TSPY3P0CV98 308 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 TSPY8P0CW00 308 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 ERCC3P19447 782 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 NUCB1Q02818 461 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 CACNB2Q08289 660 aaPredicted RBP26.14■■□□□ 1.78
HLA-F-228ENST00000486194 CCL14Q16627 93 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 PPP4R3BQ5MIZ7 849 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 SAMD1Q6SPF0 538 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms