RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 USP17L19D6RCP7 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L20D6RJB6 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L24Q0WX57 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 RASGRF1Q13972 1273 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
PTPN7-213ENST00000486116 CATSPERGQ6ZRH7 1159 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 RNF180Q86T96 592 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 COG5Q9UP83 839 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 MYO5AQ9Y4I1 1855 aaKnown RBP12.03□□□□□ -0.48
PTPN7-213ENST00000486116 ZNF521Q96K83 1311 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-213ENST00000486116 RFXAPO00287 272 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 RARBP10826 455 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 MYOGP15173 224 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-213ENST00000486116 ADORA1P30542 326 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 RABGGTBP53611 331 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 CCDC102BQ68D86 513 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 KRT40Q6A162 431 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
PTPN7-213ENST00000486116 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-213ENST00000486116 STARD7Q9NQZ5 370 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
PTPN7-213ENST00000486116 PDS5AQ29RF7 1337 aaKnown RBP12.02□□□□□ -0.49
PTPN7-213ENST00000486116 ADAMTS4O75173 837 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-213ENST00000486116 VCAM1P19320 739 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 ACLYP53396 1101 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 WWC1Q8IX03 1113 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 TEX11Q8IYF3 940 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
PTPN7-213ENST00000486116 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 ZDBF2Q9HCK1 2354 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 IL16Q14005 1332 aa12.01□□□□□ -0.49
PTPN7-213ENST00000486116 STRNO43815 780 aa12□□□□□ -0.49
PTPN7-213ENST00000486116 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
PTPN7-213ENST00000486116 SH3RF3Q8TEJ3 882 aaPredicted RBP12□□□□□ -0.49
PTPN7-213ENST00000486116 UIMC1Q96RL1 719 aa12□□□□□ -0.49
PTPN7-213ENST00000486116 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
PTPN7-213ENST00000486116 IL23AQ9NPF7 189 aa12□□□□□ -0.49
PTPN7-213ENST00000486116 SPTBN4Q9H254 2564 aa12□□□□□ -0.49
PTPN7-213ENST00000486116 PTPRSQ13332 1948 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 CFAP54Q96N23 3096 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 APBB1O00213 710 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 TAL1P17542 331 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-213ENST00000486116 ERCC3P19447 782 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 CDK7P50613 346 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
PTPN7-213ENST00000486116 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 HLA-CQ95604 372 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 NSUN4Q96CB9 384 aaKnown RBP11.99□□□□□ -0.49
PTPN7-213ENST00000486116 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 FEZ1Q99689 392 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 TSEN34Q9BSV6 310 aaKnown RBP11.99□□□□□ -0.49
PTPN7-213ENST00000486116 KCNH6Q9H252 994 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
PTPN7-213ENST00000486116 SYNRGQ9UMZ2 1314 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 MCM3APO60318 1980 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 SCN5AQ14524 2016 aa11.99□□□□□ -0.49
PTPN7-213ENST00000486116 MROH7Q68CQ1 1323 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-213ENST00000486116 GH2P01242 217 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 CYP2C18P33260 490 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 CCSAPQ6IQ19 270 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-213ENST00000486116 OTOP2Q7RTS6 562 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 NUP133Q8WUM0 1156 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 SIL1Q9H173 461 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 MTIF3Q9H2K0 278 aaKnown RBP11.98□□□□□ -0.49
PTPN7-213ENST00000486116 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
PTPN7-213ENST00000486116 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 PCDHA11Q9Y5I1 949 aa11.98□□□□□ -0.49
PTPN7-213ENST00000486116 MYADML2A6NDP7 307 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 CIAO1O76071 339 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 FGBP02675 491 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 LDHCP07864 332 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-213ENST00000486116 FOXP4Q8IVH2 680 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-213ENST00000486116 MAPKAPK5Q8IW41 473 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 CRACR2BQ8N4Y2 399 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-213ENST00000486116 KLHDC9Q8NEP7 349 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 ACER1Q8TDN7 264 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 ANKS1AQ92625 1134 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 SPATC1LQ9H0A9 340 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 KIAA1683Q9H0B3 1180 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 CERS4Q9HA82 394 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 CEP126Q9P2H0 1117 aa11.97□□□□□ -0.49
PTPN7-213ENST00000486116 FLT1P17948 1338 aa11.96□□□□□ -0.49
PTPN7-213ENST00000486116 UMODL1Q5DID0 1318 aa11.96□□□□□ -0.49
PTPN7-213ENST00000486116 AKR1A1P14550 325 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms