RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 ABHD4Q8TB40 342 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 TRIT1Q9H3H1 467 aaKnown RBP7.4□□□□□ -1.22
GCFC2-209ENST00000486016 GPATCH2Q9NW75 528 aa7.4□□□□□ -1.22
GCFC2-209ENST00000486016 ZGLP1P0C6A0 271 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 GBP2P32456 591 aaPredicted RBP7.39□□□□□ -1.23
GCFC2-209ENST00000486016 REC114Q7Z4M0 266 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 RELL1Q8IUW5 271 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 FBXO27Q8NI29 283 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 BAHD1Q8TBE0 780 aaPredicted RBP7.39□□□□□ -1.23
GCFC2-209ENST00000486016 KCNK12Q9HB15 430 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 ZNF281Q9Y2X9 895 aa7.39□□□□□ -1.23
GCFC2-209ENST00000486016 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
GCFC2-209ENST00000486016 NPIPB6E9PJ23 425 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 HK2P52789 917 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 CTSWP56202 376 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 PWP1Q13610 501 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 MPP2Q14168 576 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 FBXO15Q8NCQ5 510 aaPredicted RBP7.38□□□□□ -1.23
GCFC2-209ENST00000486016 MYLIPQ8WY64 445 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 KREMEN1Q96MU8 473 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 DUSP13Q9UII6 198 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
GCFC2-209ENST00000486016 GRIN3BO60391 1043 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 GREM1O60565 184 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 ERCC3P19447 782 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 TRHRP34981 398 aaPredicted RBP7.37□□□□□ -1.23
GCFC2-209ENST00000486016 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 EGR3Q06889 387 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 GOLM1Q8NBJ4 401 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 DIRC2Q96SL1 478 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 NSUN3Q9H649 340 aaKnown RBP7.37□□□□□ -1.23
GCFC2-209ENST00000486016 COPRSQ9NQ92 184 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 VTI1BQ9UEU0 232 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 EBF1Q9UH73 591 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 JAG2Q9Y219 1238 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 PCDHA11Q9Y5I1 949 aa7.37□□□□□ -1.23
GCFC2-209ENST00000486016 SHISA3A0PJX4 238 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 RAC2P15153 192 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 FBXL19Q6PCT2 694 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 PDZD8Q8NEN9 1154 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 CCDC74BQ96LY2 380 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 ASPNQ9BXN1 380 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 LRRC3Q9BY71 257 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 KBTBD4Q9NVX7 518 aa7.36□□□□□ -1.23
GCFC2-209ENST00000486016 TEKQ02763 1124 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 NR0B2Q15466 257 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 TIGD5Q53EQ6 642 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 DIEXFQ68CQ4 756 aaKnown RBP7.35□□□□□ -1.23
GCFC2-209ENST00000486016 KIF2CQ99661 725 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 RNF32Q9H0A6 362 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 KLHL3Q9UH77 587 aa7.35□□□□□ -1.23
GCFC2-209ENST00000486016 SLC22A31A6NKX4 558 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 RGS13O14921 159 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 ATE1O95260 518 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 MED14OSP0DP75 135 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 C19orf44Q9H6X5 657 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 MRS2Q9HD23 443 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 CD320Q9NPF0 282 aa7.34□□□□□ -1.23
GCFC2-209ENST00000486016 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 UBOX5O94941 541 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 TMEM253P0C7T8 217 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 LINC01599Q8WXQ3 324 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 G6PC3Q9BUM1 346 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 EPB41L4BQ9H329 900 aa7.33□□□□□ -1.24
GCFC2-209ENST00000486016 DCP1AQ9NPI6 582 aaPredicted RBP7.33□□□□□ -1.24
GCFC2-209ENST00000486016 NOTOA8MTQ0 251 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 TNNI2P48788 182 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 MRPL58Q14197 206 aaKnown RBP7.32□□□□□ -1.24
GCFC2-209ENST00000486016 KCNA10Q16322 511 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 CCDC27Q2M243 656 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 SHISA4Q96DD7 197 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 BRMS1Q9HCU9 246 aa7.32□□□□□ -1.24
GCFC2-209ENST00000486016 TLR3O15455 904 aaKnown RBP7.31□□□□□ -1.24
GCFC2-209ENST00000486016 HOXA5P20719 270 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 GLDCP23378 1020 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 LTKP29376 864 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 EIF4A3P38919 411 aaKnown RBP7.31□□□□□ -1.24
GCFC2-209ENST00000486016 CRKP46108 304 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 CIAPIN1Q6FI81 312 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 ATG14Q6ZNE5 492 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 C20orf173Q96LM9 149 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 GZF1Q9H116 711 aaPredicted RBP7.31□□□□□ -1.24
GCFC2-209ENST00000486016 EHMT1Q9H9B1 1298 aa7.31□□□□□ -1.24
GCFC2-209ENST00000486016 FITM1A5D6W6 292 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 ETV2O00321 342 aaPredicted RBP7.3□□□□□ -1.24
GCFC2-209ENST00000486016 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 LDLRAD1Q5T700 205 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 CDCP2Q5VXM1 449 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 PHACTR4Q8IZ21 702 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 OXR1Q8N573 874 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 ENOX1Q8TC92 643 aaKnown RBP7.3□□□□□ -1.24
GCFC2-209ENST00000486016 DHX38Q92620 1227 aaKnown RBP7.3□□□□□ -1.24
GCFC2-209ENST00000486016 HDAC8Q9BY41 377 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 PCDHB14Q9Y5E9 798 aa7.3□□□□□ -1.24
GCFC2-209ENST00000486016 EFEMP2O95967 443 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms