RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 CCDC178Q5BJE1 867 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 KIAA1755Q5JYT7 1200 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 CYB5R4Q7L1T6 521 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 KCNB2Q92953 911 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 SLC45A1Q9Y2W3 748 aa27.85■■■□□ 2.05
ABCF3-216ENST00000485921 LOC285556D6RIA3 1793 aa27.84■■■□□ 2.05
ABCF3-216ENST00000485921 HSPA1AP0DMV8 641 aaKnown RBP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 HSPA1BP0DMV9 641 aaKnown RBP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 PABPC4Q13310 644 aaKnown RBP eCLIP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 TAF1CQ15572 869 aaPredicted RBP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 LRRC47Q8N1G4 583 aaKnown RBP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 LPAR1Q92633 364 aa27.84■■■□□ 2.05
ABCF3-216ENST00000485921 TTC14Q96N46 770 aa27.84■■■□□ 2.05
ABCF3-216ENST00000485921 ZSCAN10Q96SZ4 725 aaPredicted RBP27.84■■■□□ 2.05
ABCF3-216ENST00000485921 SYNPO2Q9UMS6 1093 aa27.84■■■□□ 2.05
ABCF3-216ENST00000485921 RAD21O60216 631 aa27.83■■■□□ 2.05
ABCF3-216ENST00000485921 SEC24BO95487 1268 aa27.83■■■□□ 2.05
ABCF3-216ENST00000485921 VCAM1P19320 739 aa27.83■■■□□ 2.05
ABCF3-216ENST00000485921 MB21D2Q8IYB1 491 aaPredicted RBP27.83■■■□□ 2.05
ABCF3-216ENST00000485921 SPICE1Q8N0Z3 855 aa27.83■■■□□ 2.05
ABCF3-216ENST00000485921 UBAC1Q9BSL1 405 aa27.83■■■□□ 2.05
ABCF3-216ENST00000485921 F5H6K3 240 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 TBC1D8O95759 1140 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 HOXA7P31268 230 aaPredicted RBP27.82■■■□□ 2.04
ABCF3-216ENST00000485921 KLRC3Q07444 240 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 CRHR2Q13324 411 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 KRT32Q14532 448 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 RCSD1Q6JBY9 416 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 ZFYVE28Q9HCC9 887 aa27.82■■■□□ 2.04
ABCF3-216ENST00000485921 TOP1P11387 765 aaKnown RBP27.81■■■□□ 2.04
ABCF3-216ENST00000485921 OSBPP22059 807 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 MCCP23508 829 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 CHST3Q7LGC8 479 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 DGKHQ86XP1 1220 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 PARK7Q99497 189 aaKnown RBP27.81■■■□□ 2.04
ABCF3-216ENST00000485921 TMEM47Q9BQJ4 181 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 CFHR5Q9BXR6 569 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 RPAP3Q9H6T3 665 aaPredicted RBP27.81■■■□□ 2.04
ABCF3-216ENST00000485921 TSKSQ9UJT2 592 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 SNX14Q9Y5W7 946 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 TNKSO95271 1327 aa27.81■■■□□ 2.04
ABCF3-216ENST00000485921 MYH4Q9Y623 1939 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L15C9J2P7 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L13C9JLJ4 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L11C9JVI0 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L18D6R9N7 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L22D6RA61 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L17D6RBQ6 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L19D6RCP7 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L20D6RJB6 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 NDUFB10O96000 172 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 CYP2C8P10632 490 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 USP17L24Q0WX57 530 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 ENAHQ8N8S7 591 aaPredicted RBP27.8■■■□□ 2.04
ABCF3-216ENST00000485921 GMCL1P1Q8NEA9 526 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 ANKS1AQ92625 1134 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 NEK1Q96PY6 1258 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 ASCC2Q9H1I8 757 aaPredicted RBP27.8■■■□□ 2.04
ABCF3-216ENST00000485921 R3HDMLQ9H3Y0 253 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 PNMA3Q9UL41 463 aa27.8■■■□□ 2.04
ABCF3-216ENST00000485921 WDR46O15213 610 aaKnown RBP27.79■■■□□ 2.04
ABCF3-216ENST00000485921 FOXN1O15353 648 aa27.79■■■□□ 2.04
ABCF3-216ENST00000485921 MCM5P33992 734 aa27.79■■■□□ 2.04
ABCF3-216ENST00000485921 ANTXR2P58335 489 aa27.79■■■□□ 2.04
ABCF3-216ENST00000485921 IRX3P78415 501 aaPredicted RBP27.79■■■□□ 2.04
ABCF3-216ENST00000485921 ADCK5Q3MIX3 580 aa27.79■■■□□ 2.04
ABCF3-216ENST00000485921 IFIT3O14879 490 aaKnown RBP27.78■■■□□ 2.04
ABCF3-216ENST00000485921 COL9A3Q14050 684 aaPredicted RBP27.78■■■□□ 2.04
ABCF3-216ENST00000485921 SLFN13Q68D06 897 aa27.78■■■□□ 2.04
ABCF3-216ENST00000485921 CATSPERGQ6ZRH7 1159 aa27.78■■■□□ 2.04
ABCF3-216ENST00000485921 TANGO6Q9C0B7 1094 aa27.78■■■□□ 2.04
ABCF3-216ENST00000485921 ERICH2A1L162 156 aa27.77■■■□□ 2.04
ABCF3-216ENST00000485921 PRC1O43663 620 aa27.77■■■□□ 2.04
ABCF3-216ENST00000485921 SART3Q15020 963 aaKnown RBP27.77■■■□□ 2.04
ABCF3-216ENST00000485921 SEC23AQ15436 765 aa27.77■■■□□ 2.04
ABCF3-216ENST00000485921 NUP88Q99567 741 aaPredicted RBP27.77■■■□□ 2.04
ABCF3-216ENST00000485921 TLR2O60603 784 aa27.76■■■□□ 2.03
ABCF3-216ENST00000485921 FAM83BQ5T0W9 1011 aa27.76■■■□□ 2.03
ABCF3-216ENST00000485921 IFIT1BQ5T764 474 aaKnown RBP27.76■■■□□ 2.03
ABCF3-216ENST00000485921 SMCR8Q8TEV9 937 aaPredicted RBP27.76■■■□□ 2.03
ABCF3-216ENST00000485921 JAKMIP1Q96N16 626 aaKnown RBP27.76■■■□□ 2.03
ABCF3-216ENST00000485921 P2RX7Q99572 595 aaKnown RBP27.76■■■□□ 2.03
ABCF3-216ENST00000485921 MTMR7Q9Y216 660 aa27.76■■■□□ 2.03
ABCF3-216ENST00000485921 TMEM67Q5HYA8 995 aa27.75■■■□□ 2.03
ABCF3-216ENST00000485921 CHMP4CQ96CF2 233 aa27.75■■■□□ 2.03
ABCF3-216ENST00000485921 KAT14Q9H8E8 782 aa27.75■■■□□ 2.03
ABCF3-216ENST00000485921 ADGRA2Q96PE1 1338 aa27.74■■■□□ 2.03
ABCF3-216ENST00000485921 HMGB1P09429 215 aaKnown RBP27.74■■■□□ 2.03
ABCF3-216ENST00000485921 HSPA8P11142 646 aaKnown RBP27.74■■■□□ 2.03
ABCF3-216ENST00000485921 CTCFP49711 727 aaPredicted RBP27.74■■■□□ 2.03
ABCF3-216ENST00000485921 DHX32Q7L7V1 743 aaKnown RBP27.74■■■□□ 2.03
ABCF3-216ENST00000485921 IGDCC4Q8TDY8 1250 aa27.74■■■□□ 2.03
ABCF3-216ENST00000485921 GMCL1Q96IK5 515 aa27.74■■■□□ 2.03
ABCF3-216ENST00000485921 MTA3Q9BTC8 594 aa27.74■■■□□ 2.03
ABCF3-216ENST00000485921 SLC1A4P43007 532 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 HERVK_113P62684 666 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 COG2Q14746 738 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 WTAPQ15007 396 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 PNMA1Q8ND90 353 aa27.73■■■□□ 2.03
ABCF3-216ENST00000485921 TMEM87BQ96K49 555 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms