RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ARHGEF5Q12774 1597 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 CEP170Q5SW79 1584 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 DHX29Q7Z478 1369 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 KTN1Q86UP2 1357 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 ZNF503-AS2A6NEH8 195 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 CLGNO14967 610 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 HNRNPUQ00839 825 aaKnown RBP eCLIP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 PTPN12Q05209 780 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 FOXD4Q12950 439 aaPredicted RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 AP3B2Q13367 1082 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 TTLL4Q14679 1199 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 ENOX2Q16206 610 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 AOC3Q16853 763 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 KIF4BQ2VIQ3 1234 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 MPRIPQ6WCQ1 1025 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 TSHZ1Q6ZSZ6 1077 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 SMYD4Q8IYR2 804 aaPredicted RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 DDX54Q8TDD1 881 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 HEXIM2Q96MH2 286 aaKnown RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 DUSP23Q9BVJ7 150 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 PRDM7Q9NQW5 492 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 KLHL42Q9P2K6 505 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 KIF14Q15058 1648 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 PRG4Q92954 1404 aaPredicted RBP5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 RNF123Q5XPI4 1314 aa5.07□□□□□ -1.6
PRPF38B-205ENST00000485810 INSRP06213 1382 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 CCDC194A0A1B0GVG4 234 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 PPFIA4O75335 1185 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 DEKP35659 375 aaKnown RBP5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 ID3Q02535 119 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 IFI16Q16666 785 aaKnown RBP5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 RPS26P11Q5JNZ5 115 aaPredicted RBP5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 CASC1Q6TDU7 716 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 PDZD3Q86UT5 571 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 C1QL4Q86Z23 238 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 KCNB2Q92953 911 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 ZNF622Q969S3 477 aaKnown RBP eCLIP5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 TNKS2Q9H2K2 1166 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 MKNK2Q9HBH9 465 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 JADE2Q9NQC1 790 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 PPP4R2Q9NY27 417 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 SMG6Q86US8 1419 aaKnown RBP5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 ANKRD50Q9ULJ7 1429 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 KDM5CP41229 1560 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 SBNO2Q9Y2G9 1366 aa5.06□□□□□ -1.6
PRPF38B-205ENST00000485810 FBXO24O75426 580 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 CEACAM5P06731 702 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 GSTP1P09211 210 aaKnown RBP5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 HCLS1P14317 486 aaPredicted RBP5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 PTPROQ16827 1216 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 FLAD1Q8NFF5 587 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 OSBPL7Q9BZF2 842 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 ATXN3LQ9H3M9 355 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 TMEM39AQ9NV64 488 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 CFDP1Q9UEE9 299 aaPredicted RBP5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 PNMA2Q9UL42 364 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 COMMD10Q9Y6G5 202 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 USP47Q96K76 1375 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 ZMYM4Q5VZL5 1548 aa5.05□□□□□ -1.6
PRPF38B-205ENST00000485810 EXOC5O00471 708 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 NRDCO43847 1150 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 HSP90AA1P07900 732 aaKnown RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ZNF865P0CJ78 1059 aaPredicted RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 FYB2Q5VWT5 728 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 C9orf84Q5VXU9 1444 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 SLC23A3Q6PIS1 610 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 TPTE2Q6XPS3 522 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 GRIN3AQ8TCU5 1115 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 GIPC2Q8TF65 315 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ISL2Q96A47 359 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 FAM84AQ96KN4 292 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 HRASLS5Q96KN8 279 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ATP10BO94823 1461 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PLB1Q6P1J6 1458 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 MAST1Q9Y2H9 1570 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 TLDC2A0PJX2 215 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PAGE1O75459 146 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ZRANB2O95218 330 aaKnown RBP eCLIP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PARNO95453 639 aaKnown RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 SLFN14P0C7P3 912 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PAX3P23760 479 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 MAP1SQ66K74 1059 aaPredicted RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 UBE3DQ7Z6J8 389 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 SULF2Q8IWU5 870 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ZSCAN29Q8IWY8 852 aaPredicted RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 TOP6BLQ8N6T0 577 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 C3orf58Q8NDZ4 430 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PMM1Q92871 262 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 PIDD1Q9HB75 910 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 CBX8Q9HC52 389 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 MRS2Q9HD23 443 aa5.04□□□□□ -1.6
PRPF38B-205ENST00000485810 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms