RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DDX60LQ5H9U9 1706 aaKnown RBP14.86□□□□□ -0.03
PTCD1-205ENST00000485746 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 PHIPQ8WWQ0 1821 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 TSPY2A6NKD2 308 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 RANBP6O60518 1105 aaKnown RBP14.85□□□□□ -0.03
PTCD1-205ENST00000485746 MYCP01106 439 aaPredicted RBP14.85□□□□□ -0.03
PTCD1-205ENST00000485746 FGAP02671 866 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 CCNA1P78396 465 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 PRKCZQ05513 592 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 RRP12Q5JTH9 1297 aaKnown RBP14.85□□□□□ -0.03
PTCD1-205ENST00000485746 WDR78Q5VTH9 848 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 CENPQQ7L2Z9 268 aaPredicted RBP14.85□□□□□ -0.03
PTCD1-205ENST00000485746 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 HOXC10Q9NYD6 342 aa14.85□□□□□ -0.03
PTCD1-205ENST00000485746 FLOT1O75955 427 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
PTCD1-205ENST00000485746 ERVK-9P63128 1117 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 ERVK-24P63145 666 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 COG2Q14746 738 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 SIAH1Q8IUQ4 282 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 SH3TC2Q8TF17 1288 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 RBPJLQ9UBG7 517 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 ISY1Q9ULR0 285 aaKnown RBP14.84□□□□□ -0.03
PTCD1-205ENST00000485746 GABRQQ9UN88 632 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 RABGAP1Q9Y3P9 1069 aa14.84□□□□□ -0.03
PTCD1-205ENST00000485746 WDR46O15213 610 aaKnown RBP14.83□□□□□ -0.04
PTCD1-205ENST00000485746 FOXP2O15409 715 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 PEX10O60683 326 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 TTLL1O95922 423 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.04
PTCD1-205ENST00000485746 MAPK4P31152 587 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 GRK4P32298 578 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 FLT3LGP49771 235 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 HAND2P61296 217 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 KIAA1755Q5JYT7 1200 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCD1-205ENST00000485746 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 INCENPQ9NQS7 918 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 ANAPC4Q9UJX5 808 aa14.83□□□□□ -0.04
PTCD1-205ENST00000485746 CTDP1Q9Y5B0 961 aaPredicted RBP14.83□□□□□ -0.04
PTCD1-205ENST00000485746 BAZ2AQ9UIF9 1905 aaKnown RBP14.83□□□□□ -0.04
PTCD1-205ENST00000485746 ZNF213O14771 459 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 ADCY3O60266 1144 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 UBXN2AP68543 259 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 PLS1Q14651 629 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 Q3C1V9 767 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 MFSD6Q6ZSS7 791 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 NEDD1Q8NHV4 660 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 MTMR4Q9NYA4 1195 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 CTNNA3Q9UI47 895 aa14.82□□□□□ -0.04
PTCD1-205ENST00000485746 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
PTCD1-205ENST00000485746 F5H6K3 240 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 DSG3P32926 999 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 KLRC3Q07444 240 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 FAM83BQ5T0W9 1011 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 PLEKHH3Q7Z736 793 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 SLAIN1Q8ND83 568 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 NUDT12Q9BQG2 462 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 RNF41Q9H4P4 317 aaPredicted RBP14.81□□□□□ -0.04
PTCD1-205ENST00000485746 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 IVNS1ABPQ9Y6Y0 642 aa14.81□□□□□ -0.04
PTCD1-205ENST00000485746 LOC285556D6RIA3 1793 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 IMMTQ16891 758 aaKnown RBP14.8□□□□□ -0.04
PTCD1-205ENST00000485746 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
PTCD1-205ENST00000485746 MB21D1Q8N884 522 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 ZNF333Q96JL9 665 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 DSCC1Q9BVC3 393 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 PORCNQ9H237 461 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 BTBD7Q9P203 1132 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 MTMR7Q9Y216 660 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTCD1-205ENST00000485746 ZMYM6O95789 1325 aa14.8□□□□□ -0.04
PTCD1-205ENST00000485746 ORC4O43929 436 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 CNMDO75829 334 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 PTPRFP10586 1907 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 CYP2B6P20813 491 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 CHMLP26374 656 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 MLLT1Q03111 559 aaPredicted RBP14.79□□□□□ -0.04
PTCD1-205ENST00000485746 IKQ13123 557 aaPredicted RBP14.79□□□□□ -0.04
PTCD1-205ENST00000485746 IRF5Q13568 498 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 LBX2Q6XYB7 198 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 SOCS4Q8WXH5 440 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 MKL1Q969V6 931 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 CHMP4CQ96CF2 233 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 ATG4CQ96DT6 458 aa14.79□□□□□ -0.04
PTCD1-205ENST00000485746 NUP88Q99567 741 aaPredicted RBP14.79□□□□□ -0.04
PTCD1-205ENST00000485746 RAD50Q92878 1312 aa14.78□□□□□ -0.04
PTCD1-205ENST00000485746 NDUFB10O96000 172 aa14.78□□□□□ -0.04
PTCD1-205ENST00000485746 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms