RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 C12orf42Q96LP6 360 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 ELP3Q9H9T3 547 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 FAM217BQ9NTX9 383 aaPredicted RBP18.56■□□□□ 0.56
APOE-205ENST00000485628 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
APOE-205ENST00000485628 C19orf81C9J6K1 198 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 CXCL11O14625 94 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 MCM2P49736 904 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 SPP2Q13103 211 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 MOGSQ13724 837 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 ZNF654Q8IZM8 581 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 SLC10A4Q96EP9 437 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 VCPKMTQ9H867 229 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 AS3MTQ9HBK9 375 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
APOE-205ENST00000485628 F5H6K3 240 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 IRF6O14896 467 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 DDAH1O94760 285 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 LARGE1O95461 756 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 PDHBP11177 359 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 APLP1P51693 650 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 HUNKP57058 714 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 KLRC3Q07444 240 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 ST3GAL1Q11201 340 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 ME3Q16798 604 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
APOE-205ENST00000485628 OPTNQ96CV9 577 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 GMCL1Q96IK5 515 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 WNK4Q96J92 1243 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 MS4A4AQ96JQ5 239 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
APOE-205ENST00000485628 KAT14Q9H8E8 782 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 LOC285556D6RIA3 1793 aa18.54■□□□□ 0.56
APOE-205ENST00000485628 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
APOE-205ENST00000485628 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 FAM155AB1AL88 458 aaPredicted RBP18.53■□□□□ 0.56
APOE-205ENST00000485628 PFKFB2O60825 505 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
APOE-205ENST00000485628 SPRYD7Q5W111 196 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
APOE-205ENST00000485628 SH2D4AQ9H788 454 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 CREBZFQ9NS37 354 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 RBM19Q9Y4C8 960 aaKnown RBP18.53■□□□□ 0.56
APOE-205ENST00000485628 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 RLFQ13129 1914 aa18.53■□□□□ 0.56
APOE-205ENST00000485628 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
APOE-205ENST00000485628 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 NDUFB10O96000 172 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 USP14P54578 494 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 GRM4Q14833 912 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 PPP2R5BQ15173 497 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 RGMBQ6NW40 437 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 RASAL3Q86YV0 1011 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 FANCBQ8NB91 859 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 LPAR1Q92633 364 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
APOE-205ENST00000485628 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.56
APOE-205ENST00000485628 TESPA1A2RU30 521 aaPredicted RBP18.51■□□□□ 0.55
APOE-205ENST00000485628 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 PLA2G6O60733 806 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 SLC10A3P09131 477 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 CALM1P0DP23 149 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 CALM2P0DP24 149 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 CALM3P0DP25 149 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 FUT2Q10981 343 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 MTMR2Q13614 643 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 NTRK3Q16288 839 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 RASGRP2Q7LDG7 609 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 OTUD5Q96G74 571 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 TMX3Q96JJ7 454 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 PARP14Q460N5 1801 aa18.51■□□□□ 0.55
APOE-205ENST00000485628 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 ZBTB43O43298 467 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 CDC27P30260 824 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 FGD1P98174 961 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 CUL4AQ13619 759 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 SLC35G1Q2M3R5 365 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 SLFN13Q68D06 897 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 BTNL9Q6UXG8 535 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 NFXL1Q6ZNB6 911 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 PROCA1Q8NCQ7 364 aaPredicted RBP18.5■□□□□ 0.55
APOE-205ENST00000485628 DCAF4Q8WV16 495 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
APOE-205ENST00000485628 SH2B1Q9NRF2 756 aaPredicted RBP18.5■□□□□ 0.55
APOE-205ENST00000485628 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 SCRN1Q12765 414 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 DGKZQ13574 1117 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 STAG2Q8N3U4 1231 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 GTF3C6Q969F1 213 aa18.49■□□□□ 0.55
APOE-205ENST00000485628 WDR46O15213 610 aaKnown RBP18.48■□□□□ 0.55
APOE-205ENST00000485628 CTDNEP1O95476 244 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 VCAM1P19320 739 aa18.48■□□□□ 0.55
APOE-205ENST00000485628 HOXA7P31268 230 aaPredicted RBP18.48■□□□□ 0.55
APOE-205ENST00000485628 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms