RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 APLP1P51693 650 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 SYNE3Q6ZMZ3 975 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
CHMP3-207ENST00000485465 ZNF654Q8IZM8 581 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 GMCL1P1Q8NEA9 526 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 FEZ1Q99689 392 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 KIAA1683Q9H0B3 1180 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 TPCN1Q9ULQ1 816 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 ABT1Q9ULW3 272 aaKnown RBP20.57■□□□□ 0.88
CHMP3-207ENST00000485465 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
CHMP3-207ENST00000485465 TRIM75PA6NK02 468 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 GJA5P36382 358 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 BACE1P56817 501 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 MTMR2Q13614 643 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 APOA5Q6Q788 366 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 SNX21Q969T3 373 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 ZNF274Q96GC6 653 aaPredicted RBP20.56■□□□□ 0.88
CHMP3-207ENST00000485465 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 GOPCQ9HD26 462 aa20.56■□□□□ 0.88
CHMP3-207ENST00000485465 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 C19orf81C9J6K1 198 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 F5H6K3 240 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 CXCL11O14625 94 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 IRF6O14896 467 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 ZBTB43O43298 467 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 DDAH1O94760 285 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 PDIA3P30101 505 aaKnown RBP20.55■□□□□ 0.88
CHMP3-207ENST00000485465 USP14P54578 494 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 KLRC3Q07444 240 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 TROAPQ12815 778 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 ZYXQ15942 572 aaKnown RBP20.55■□□□□ 0.88
CHMP3-207ENST00000485465 SLFN13Q68D06 897 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 RGMBQ6NW40 437 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 MYL10Q9BUA6 226 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 VCPKMTQ9H867 229 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 NAP1L2Q9ULW6 460 aaPredicted RBP20.55■□□□□ 0.88
CHMP3-207ENST00000485465 KCNH4Q9UQ05 1017 aa20.55■□□□□ 0.88
CHMP3-207ENST00000485465 GOLGA8BA8MQT2 603 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 NDUFB10O96000 172 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 CALM1P0DP23 149 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 CALM2P0DP24 149 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 CALM3P0DP25 149 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 ZNF157P51786 506 aaPredicted RBP20.54■□□□□ 0.88
CHMP3-207ENST00000485465 SPRYD7Q5W111 196 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 USP17L2Q6R6M4 530 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 NUP133Q8WUM0 1156 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 HHIPL1Q96JK4 782 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 CREBZFQ9NS37 354 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 MTMR7Q9Y216 660 aa20.54■□□□□ 0.88
CHMP3-207ENST00000485465 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 RAD21O60216 631 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 RCAN1P53805 252 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 ME3Q16798 604 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 SH3D19Q5HYK7 790 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 KIAA1755Q5JYT7 1200 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 RAB11FIP4Q86YS3 637 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 RASAL3Q86YV0 1011 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 ZSCAN31Q96LW9 406 aaPredicted RBP20.53■□□□□ 0.88
CHMP3-207ENST00000485465 MAP3K14Q99558 947 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 EMILIN3Q9NT22 766 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 HPS5Q9UPZ3 1129 aa20.53■□□□□ 0.88
CHMP3-207ENST00000485465 SNHG28P0DPA3 235 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 ZBTB48P10074 688 aaPredicted RBP20.52■□□□□ 0.88
CHMP3-207ENST00000485465 PDHBP11177 359 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 RXRAP19793 462 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 HMGCS2P54868 508 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 DGKZQ13574 1117 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 GRM4Q14833 912 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 SPICE1Q8N0Z3 855 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 LPAR1Q92633 364 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 CHMP4CQ96CF2 233 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 GMCL1Q96IK5 515 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 C12orf42Q96LP6 360 aa20.52■□□□□ 0.88
CHMP3-207ENST00000485465 RBM19Q9Y4C8 960 aaKnown RBP20.52■□□□□ 0.88
CHMP3-207ENST00000485465 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
CHMP3-207ENST00000485465 GOLGA8AA7E2F4 631 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 PFKFB2O60825 505 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 LARGE1O95461 756 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 METAP2P50579 478 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHMP3-207ENST00000485465 STK3Q13188 491 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
CHMP3-207ENST00000485465 CCDC144CPQ8IYA2 1237 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 FANCBQ8NB91 859 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 SLKQ9H2G2 1235 aaPredicted RBP20.51■□□□□ 0.87
CHMP3-207ENST00000485465 SH2B1Q9NRF2 756 aaPredicted RBP20.51■□□□□ 0.87
CHMP3-207ENST00000485465 TMOD4Q9NZQ9 345 aa20.51■□□□□ 0.87
CHMP3-207ENST00000485465 NID2Q14112 1375 aa20.5■□□□□ 0.87
CHMP3-207ENST00000485465 SLC10A3P09131 477 aa20.5■□□□□ 0.87
CHMP3-207ENST00000485465 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
CHMP3-207ENST00000485465 SLC1A4P43007 532 aa20.5■□□□□ 0.87
CHMP3-207ENST00000485465 CCT2P78371 535 aaKnown RBP20.5■□□□□ 0.87
CHMP3-207ENST00000485465 MKRN3Q13064 507 aaKnown RBP20.5■□□□□ 0.87
CHMP3-207ENST00000485465 HSCBQ8IWL3 235 aa20.5■□□□□ 0.87
CHMP3-207ENST00000485465 CTCFLQ8NI51 663 aaPredicted RBP20.5■□□□□ 0.87
CHMP3-207ENST00000485465 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
CHMP3-207ENST00000485465 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms