RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SLC39A14Q15043 492 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 OXER1Q8TDS5 423 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 PIBF1Q8WXW3 757 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 TNMDQ9H2S6 317 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 GOLPH3LQ9H4A5 285 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 TDRD3Q9H7E2 651 aaKnown RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 PALM3A6NDB9 673 aaPredicted RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 CAMK4Q16566 473 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 ZSCAN29Q8IWY8 852 aaPredicted RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 MRPS27Q92552 414 aaKnown RBP19.26■□□□□ 0.67
CTSA-207ENST00000484855 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 MTMR4Q9NYA4 1195 aa19.26■□□□□ 0.67
CTSA-207ENST00000484855 IGKV6D-41A0A0C4DH26 115 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 A0A1W2PQ27 194 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 A0A1W2PQ64 194 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 A0A1W2PQD8 194 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 LZTS2Q9BRK4 669 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 HDAC9Q9UKV0 1011 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 ZNRF3Q9ULT6 936 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 DDTLA6NHG4 134 aaPredicted RBP19.25■□□□□ 0.67
CTSA-207ENST00000484855 PARP1P09874 1014 aaKnown RBP19.25■□□□□ 0.67
CTSA-207ENST00000484855 RILPL1Q5EBL4 403 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 PRMT6Q96LA8 375 aaPredicted RBP19.25■□□□□ 0.67
CTSA-207ENST00000484855 PI4KBQ9UBF8 816 aa19.25■□□□□ 0.67
CTSA-207ENST00000484855 FAM160A1Q05DH4 1040 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 PTPAQ15257 358 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 JMYQ8N9B5 988 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 TRIM34Q9BYJ4 488 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 TAOK3Q9H2K8 898 aa19.24■□□□□ 0.67
CTSA-207ENST00000484855 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
CTSA-207ENST00000484855 PPP6R2O75170 966 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 GOLGA8HP0CJ92 632 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 MARCKSP29966 332 aaPredicted RBP19.23■□□□□ 0.67
CTSA-207ENST00000484855 SH3BP5LQ7L8J4 393 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 GMLQ99445 158 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 FUCA2Q9BTY2 467 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 DNAJC18Q9H819 358 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 COL2A1P02458 1487 aaPredicted RBP19.23■□□□□ 0.67
CTSA-207ENST00000484855 KLRF2D3W0D1 207 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 TTLL1O95922 423 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 RNF214Q8ND24 703 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 TMOD2Q9NZR1 351 aa19.23■□□□□ 0.67
CTSA-207ENST00000484855 ENTPD3O75355 529 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 TOB1P50616 345 aaPredicted RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 EIF6P56537 245 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 NLRP5P59047 1200 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 USP17L2Q6R6M4 530 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 LRRC47Q8N1G4 583 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 OGFOD1Q8N543 542 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 CCDC17Q96LX7 622 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 CABP5Q9NP86 173 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 ATRNL1Q5VV63 1379 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 SPDYE2BA6NHP3 402 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 CYTH3O43739 400 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 KINO60870 393 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 SPDYE6P0CI01 402 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 SLURP2P0DP57 97 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 NPY5RQ15761 445 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 SLC35G1Q2M3R5 365 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 AXDND1Q5T1B0 1012 aaPredicted RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 CLEC10AQ8IUN9 316 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 ENGASEQ8NFI3 743 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 ANP32BQ92688 251 aaKnown RBP19.22■□□□□ 0.67
CTSA-207ENST00000484855 SGIP1Q9BQI5 828 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 CD2APQ9Y5K6 639 aa19.22■□□□□ 0.67
CTSA-207ENST00000484855 A0A1B0GVL5 298 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 FAM196BA6NMK8 535 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 CCDC192P0DO97 292 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 VEGFAP15692 232 aaPredicted RBP19.21■□□□□ 0.67
CTSA-207ENST00000484855 DLGAP5Q15398 846 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 CKAP2LQ8IYA6 745 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 GPKOWQ92917 476 aaPredicted RBP eCLIP19.21■□□□□ 0.67
CTSA-207ENST00000484855 SH3GLB2Q9NR46 395 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
CTSA-207ENST00000484855 USP17L5A8MUK1 530 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 PDHBP11177 359 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 PPP4R3BQ5MIZ7 849 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 AGBL3Q8NEM8 1001 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.2■□□□□ 0.66
CTSA-207ENST00000484855 ARFGEF1Q9Y6D6 1849 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 CALML3P27482 149 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 CERKLQ49MI3 558 aaPredicted RBP19.2■□□□□ 0.66
CTSA-207ENST00000484855 FOXP4Q8IVH2 680 aaPredicted RBP19.2■□□□□ 0.66
CTSA-207ENST00000484855 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
CTSA-207ENST00000484855 TNFRSF25Q93038 417 aa19.2■□□□□ 0.66
CTSA-207ENST00000484855 PSDA5PKW4 1024 aaPredicted RBP19.19■□□□□ 0.66
CTSA-207ENST00000484855 FAM205CA6NFA0 338 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 CTAGE5O15320 804 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 CMA1P23946 247 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 NDUFA8P51970 172 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
CTSA-207ENST00000484855 NOL7Q9UMY1 257 aaKnown RBP19.19■□□□□ 0.66
CTSA-207ENST00000484855 CEP131Q9UPN4 1083 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms