RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 CALM2P0DP24 149 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 CALM3P0DP25 149 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 INPP5BP32019 993 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 EVCP57679 992 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 MAP3K9P80192 1104 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 SEPT2Q15019 361 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 APOA5Q6Q788 366 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 ZNF274Q96GC6 653 aaPredicted RBP10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 ZNF408Q9H9D4 720 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 GBA2Q9HCG7 927 aaPredicted RBP10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 OTOFQ9HC10 1997 aa10.56□□□□□ -0.72
SHROOM4-204ENST00000483955 NID2Q14112 1375 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 GOLGA8BA8MQT2 603 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 ZBTB43O43298 467 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 CELF2O95319 508 aaKnown RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 EEF2P13639 858 aaKnown RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 GUCY1A2P33402 732 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 APOBRQ0VD83 1088 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 PRKG1Q13976 671 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 VGLL4Q14135 290 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 RRP1BQ14684 758 aaKnown RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 PPP2R5BQ15173 497 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 RCSD1Q6JBY9 416 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 NOL8Q76FK4 1167 aaKnown RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 MKL1Q969V6 931 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 MAP3K14Q99558 947 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 NAP1L2Q9ULW6 460 aaPredicted RBP10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
SHROOM4-204ENST00000483955 CCDC196A0A1B0GTZ2 297 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 DHX16O60231 1041 aaKnown RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 PTPRAP18433 802 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 KIF5BP33176 963 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 FSTL1Q12841 308 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 MICU3Q86XE3 530 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 CTCFLQ8NI51 663 aaPredicted RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 FEZ1Q99689 392 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 SLKQ9H2G2 1235 aaPredicted RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 GPHNQ9NQX3 736 aaPredicted RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 CLIP2Q9UDT6 1046 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 TPCN1Q9ULQ1 816 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 SNCAIPQ9Y6H5 919 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
SHROOM4-204ENST00000483955 MYH4Q9Y623 1939 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 PFKFB2O60825 505 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 USP14P54578 494 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 JAG1P78504 1218 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 PPATQ06203 517 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 ME3Q16798 604 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 RTN1Q16799 776 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 ASPRV1Q53RT3 343 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 CLEC10AQ8IUN9 316 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 LRRC47Q8N1G4 583 aaKnown RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 GMCL1P1Q8NEA9 526 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 NUP133Q8WUM0 1156 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 TMX3Q96JJ7 454 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 BRPF3Q9ULD4 1205 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
SHROOM4-204ENST00000483955 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 USP17L10C9JJH3 530 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 CDKL5O76039 1030 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 GNAQP50148 359 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 TROAPQ12815 778 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 ERO1BQ86YB8 467 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 DCAF4Q8WV16 495 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 LPAR1Q92633 364 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 GTF3C6Q969F1 213 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 VCPKMTQ9H867 229 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.52□□□□□ -0.73
SHROOM4-204ENST00000483955 C19orf81C9J6K1 198 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms