RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
PTPN18-212ENST00000483617 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
PTPN18-212ENST00000483617 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 EPB41L4AQ9HCS5 686 aaPredicted RBP13.38□□□□□ -0.27
PTPN18-212ENST00000483617 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
PTPN18-212ENST00000483617 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
PTPN18-212ENST00000483617 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 MYPNQ86TC9 1320 aa13.38□□□□□ -0.27
PTPN18-212ENST00000483617 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
PTPN18-212ENST00000483617 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
PTPN18-212ENST00000483617 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 USP17L21D6R901 530 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 FOXP2O15409 715 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 ASNSP08243 561 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 HMGCS2P54868 508 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 SBK1Q52WX2 424 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
PTPN18-212ENST00000483617 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
PTPN18-212ENST00000483617 MKI67P46013 3256 aaKnown RBP13.37□□□□□ -0.27
PTPN18-212ENST00000483617 MGAMO43451 1857 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 ERICH2A1L162 156 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 GDF11O95390 407 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 EN2P19622 333 aaPredicted RBP13.36□□□□□ -0.27
PTPN18-212ENST00000483617 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPN18-212ENST00000483617 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 PRPF38BQ5VTL8 546 aaKnown RBP13.36□□□□□ -0.27
PTPN18-212ENST00000483617 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 ESR2Q92731 530 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 WDR18Q9BV38 432 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 MYH1P12882 1939 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
PTPN18-212ENST00000483617 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
PTPN18-212ENST00000483617 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
PTPN18-212ENST00000483617 JAG1P78504 1218 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 PRKCZQ05513 592 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 MTMR2Q13614 643 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
PTPN18-212ENST00000483617 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
PTPN18-212ENST00000483617 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
PTPN18-212ENST00000483617 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 EHD4Q9H223 541 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 ZBTB21Q9ULJ3 1066 aa13.35□□□□□ -0.27
PTPN18-212ENST00000483617 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
PTPN18-212ENST00000483617 PRC1O43663 620 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 CPA1P15085 419 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 GRK4P32298 578 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 SLC4A3P48751 1232 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 AK2P54819 239 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 BACE1P56817 501 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 C12orf60Q5U649 245 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 Q6ZUG5 572 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 STOX1Q6ZVD7 989 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 TTC14Q96N46 770 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 TMOD4Q9NZQ9 345 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
PTPN18-212ENST00000483617 B4E1Z4 1266 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
PTPN18-212ENST00000483617 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
PTPN18-212ENST00000483617 CCDC178Q5BJE1 867 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 TATDN1Q6P1N9 297 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 MTA3Q9BTC8 594 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
PTPN18-212ENST00000483617 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
PTPN18-212ENST00000483617 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
PTPN18-212ENST00000483617 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
PTPN18-212ENST00000483617 C19orf81C9J6K1 198 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 USP17L10C9JJH3 530 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 ORC4O43929 436 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 KDM4AO75164 1064 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
PTPN18-212ENST00000483617 GH2P01242 217 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 FLT3LGP49771 235 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 IRX3P78415 501 aaPredicted RBP13.32□□□□□ -0.28
PTPN18-212ENST00000483617 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
PTPN18-212ENST00000483617 MTFR1Q15390 333 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
PTPN18-212ENST00000483617 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
PTPN18-212ENST00000483617 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
PTPN18-212ENST00000483617 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms